pcev: Principal Component of Explained Variance
Version 1.1.1

Principal component of explained variance (PCEV) is a statistical tool for the analysis of a multivariate response vector. It is a dimension-reduction technique, similar to Principal component analysis (PCA), which seeks the maximize the proportion of variance (in the response vector) being explained by a set of covariates.

AuthorMaxime Turgeon [aut, cre], Aurelie Labbe [aut], Karim Oualkacha [aut]
Date of publication2016-12-05 18:28:47
MaintainerMaxime Turgeon <maxime.turgeon@mail.mcgill.ca>
LicenseGPL (>= 2)
Version1.1.1
URL http://github.com/GreenwoodLab/pcev
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("pcev")

Getting started

README.md

Popular man pages

computePCEV: Principal Component of Explained Variance
estimatePcev: Estimation of PCEV
methylation: Methylation values around BLK gene
pcev: pcev: A package for computing principal components of...
PcevObj: Constructor functions for the different pcev objects
roysPval: Roy's largest root exact test
wilksPval: Wilks' lambda exact test
See all...

All man pages Function index File listing

Man pages

computePCEV: Principal Component of Explained Variance
estimatePcev: Estimation of PCEV
methylation: Methylation values around BLK gene
pcev: pcev: A package for computing principal components of...
PcevObj: Constructor functions for the different pcev objects
permutePval: Permutation p-value
roysPval: Roy's largest root exact test
wilksPval: Wilks' lambda exact test

Functions

PcevBlock Man page Source code
PcevClassical Man page Source code
PcevObj Man page
blockMatrixDiagonal Source code
computePCEV Man page Source code
computeVIMP Source code
dtw_ls Source code
estimatePcev Man page Source code
estimatePcev.PcevBlock Man page Source code
estimatePcev.PcevClassical Man page Source code
estimatePcev.default Man page Source code
index Man page
logLik Source code
methylation Man page
pcev Man page
pcev-package Man page
permutePval Man page Source code
permutePval.PcevBlock Man page Source code
permutePval.PcevClassical Man page Source code
permutePval.default Man page Source code
pheno Man page
position Man page
print.Pcev Source code
roysPval Man page Source code
roysPval.PcevBlock Man page Source code
roysPval.PcevClassical Man page Source code
roysPval.default Man page Source code
shrink_est Source code
wilksPval Man page Source code
wilksPval.PcevBlock Man page Source code
wilksPval.PcevClassical Man page Source code
wilksPval.default Man page Source code

Files

inst
inst/doc
inst/doc/pcev.R
inst/doc/pcev.pdf
inst/doc/pcev.Rnw
NAMESPACE
NEWS.md
data
data/position.rda
data/methylation.rda
data/index.rda
data/pheno.rda
R
R/pcev.R
R/methods.R
R/estimatePcev.R
R/functions.R
vignettes
vignettes/pcev.Rnw
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/estimatePcev.Rd
man/computePCEV.Rd
man/pcev.Rd
man/PcevObj.Rd
man/permutePval.Rd
man/methylation.Rd
man/wilksPval.Rd
man/roysPval.Rd
pcev documentation built on May 20, 2017, 5:49 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.