my_circle_packing: My Circle packing plot

In pcutils: Some Useful Functions for Statistics and Visualization

My Circle packing plot

Description

My Circle packing plot

Usage

my_circle_packing(
  test,
  anno = NULL,
  mode = 1,
  Group = "level",
  Score = "weight",
  label = "label",
  show_level_name = "all",
  show_tip_label = TRUE,
  str_width = 10
)

Arguments

test	a dataframe with hierarchical structure
anno	annotation tablewith rowname for color or fill.
mode	1~2
Group	fill for mode2
Score	color for mode1
label	the labels column
show_level_name	show which level name? a vector contains some column names.
show_tip_label	show_tip_label, logical
str_width	str_width

Value

ggplot

Examples

data(otutab)
cbind(taxonomy, weight = rowSums(otutab))[1:10, ] -> test
if (requireNamespace("igraph") && requireNamespace("ggraph")) {
  my_circle_packing(test)
}

pcutils documentation built on June 26, 2024, 1:06 a.m.