pdmod: Proximal/distal modeling framework for Pavlovian conditioning phenomena

This package provides a model of Pavlovian conditioning phenomena, such as response extinction and spontaneous recovery, and partial reinforcement extinction effects. Competing proximal and distal reward predictions, computed using fast and slow learning rates, combine according to their uncertainties and the recency of information. The resulting mean prediction drives the response rate.

Author
Chloe Bracis
Date of publication
2014-03-28 19:37:19
Maintainer
Chloe Bracis <cbracis@uw.edu>
License
GPL (>= 2)
Version
1.0

View on CRAN

Man pages

averageBySession
Average by session
calculateResponse
Calculate response from the estimate
computeModel
Calculates proximal/distal model
Constants
Constants
fitModel
Fit model parameters
isTimedVector
Is TimedVector
modelObjectiveFunction
Objective function to fit model parameters
pdmod-package
Proximal/Distal Modeling Framework
plot.pdmod
Plot model
TimedVector
Create a TimedVector
verifyTimedVector
Verify TimedVector

Files in this package

pdmod
pdmod/inst
pdmod/inst/doc
pdmod/inst/doc/pdmod.pdf
pdmod/inst/doc/pdmod.R
pdmod/inst/doc/pdmod.Rnw
pdmod/inst/unitTests
pdmod/inst/unitTests/Makefile
pdmod/inst/unitTests/runit.TimedVector.R
pdmod/inst/unitTests/runit.model.R
pdmod/tests
pdmod/tests/runUnitTests.R
pdmod/src
pdmod/src/model.c
pdmod/NAMESPACE
pdmod/R
pdmod/R/verifyTimedVector.R
pdmod/R/isTimedVector.R
pdmod/R/computeModel.R
pdmod/R/cTimedVector.R
pdmod/R/timeTimedVector.R
pdmod/R/fitModel.R
pdmod/R/TimedVector.R
pdmod/R/modelObjectiveFunction.R
pdmod/R/averageBySession.R
pdmod/R/plot.pdmod.R
pdmod/R/constants.R
pdmod/R/printTimedVector.R
pdmod/R/calculateResponse.R
pdmod/vignettes
pdmod/vignettes/pdmod.synctex.gz
pdmod/vignettes/pdmod.Rnw
pdmod/vignettes/figure
pdmod/vignettes/figure/response.pdf
pdmod/vignettes/figure/compute_model.pdf
pdmod/vignettes/figure/fit_model.pdf
pdmod/vignettes/pdmod-concordance.tex
pdmod/MD5
pdmod/build
pdmod/build/vignette.rds
pdmod/DESCRIPTION
pdmod/man
pdmod/man/isTimedVector.Rd
pdmod/man/fitModel.Rd
pdmod/man/pdmod-package.Rd
pdmod/man/modelObjectiveFunction.Rd
pdmod/man/calculateResponse.Rd
pdmod/man/computeModel.Rd
pdmod/man/Constants.Rd
pdmod/man/verifyTimedVector.Rd
pdmod/man/TimedVector.Rd
pdmod/man/plot.pdmod.Rd
pdmod/man/averageBySession.Rd