permubiome: A Permutation Based Test for Biomarker Discovery in Microbiome Data

All the functions compiled in this package were created to perform permutation-based non-parametric analysis on microbiome data for biomarker discovery aims. This test executes thousands of comparisons in pairwise manner, after random shuffling of data into the different groups of study.

AuthorAlfonso Benitez-Paez
Date of publication2016-03-23 00:34:11
MaintainerAlfonso Benitez-Paez <abenitez@iata.csic.es>
LicenseGPL-2
Version1.1

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Files in this package

permubiome
permubiome/inst
permubiome/inst/extdat
permubiome/inst/extdat/DATA_2
permubiome/inst/extdat/DATA_1
permubiome/NAMESPACE
permubiome/R
permubiome/R/get.data.R permubiome/R/plots.R permubiome/R/permutation.R permubiome/R/normalize.R
permubiome/MD5
permubiome/build
permubiome/build/partial.rdb
permubiome/DESCRIPTION
permubiome/man
permubiome/man/get.data.Rd permubiome/man/permubiome.Rd permubiome/man/plots.Rd permubiome/man/permutation.Rd permubiome/man/normalize.Rd

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