perspectev: Permutation of Species During Turnover Events

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Provides a robust framework for analyzing the extent to which differential survival with respect to higher level trait variation is reducible to lower level variation. In addition to its primary test, it also provides functions for simulation-based power analysis, reading in common data set formats, and visualizing results. Temporarily contains an edited version of function hr.mcp() from package 'wild1', written by Glen Sargeant. For tutorial see: http://evolve.zoo.ox.ac.uk/Evolve/Perspectev.html.

Author
Kenneth B. Hoehn [aut, cre], Glen A. Sargeant [ctb]
Date of publication
2015-08-09 20:41:37
Maintainer
Kenneth B. Hoehn <perspectev@gmail.com>
License
GPL-3
Version
1.1

View on CRAN

Man pages

perspectev.calc
Calculate upper and lower level trait values and survivorship
perspectev-datasets
Supplied data sets
perspectev-internal
Internal Functions
perspectev-package
Permutation of Species During Turnover Events
perspectev.plot
Plotting function for permutation analysis
perspectev.read
Convert occurrence data to perspectev input format
perspectev.simulate
Simulate upper/lower level selection at different intensities...
perspectev.test
Test for irreducibility of relationship between upper level...

Files in this package

perspectev
perspectev/inst
perspectev/inst/CITATION
perspectev/NAMESPACE
perspectev/data
perspectev/data/occurrence_data.rda
perspectev/data/testData.rda
perspectev/R
perspectev/R/hr.mcp.R
perspectev/R/perspectev.R
perspectev/MD5
perspectev/DESCRIPTION
perspectev/man
perspectev/man/perspectev.test.Rd
perspectev/man/perspectev.read.Rd
perspectev/man/perspectev.plot.Rd
perspectev/man/perspectev.calc.Rd
perspectev/man/perspectev-internal.Rd
perspectev/man/perspectev-package.Rd
perspectev/man/perspectev-datasets.Rd
perspectev/man/perspectev.simulate.Rd
perspectev/man/hr.mcp.rd