autoFilter | A multiple-approach filtering procedure |
bartlett2009 | Bartlett 2009 raw data |
bartlett2009.filtered | Bartlett 2009 dataset filtered |
bartlett2009.fitted | Bartlett 2009 dataset with computed fitting and uncertainty... |
bartlett2009.processed | Bartlett 2009 dataset processed by greenExplore function |
BeckFit | Fit a double logistic equation to a time series according to... |
combineUncertainty | An evolution of 'greenProcess' for the combination of... |
convert | Convert in data.frame a 'zoo' or 'ts' object |
convertROI | Convert a region of interest object from the old structure to... |
CutSeason | Cut time series by visual estimation |
DrawMULTIROI | Draw a Region of Interest |
editExposure | Change erroneous exposure values by hand |
ElmoreFit | Fit a double logistic equation to a time series according to... |
extract | Extract items from an object of class phenopix |
extractDateFilename | Estract dates from filenames |
extractParameters | Extract fitting parameters from a pixel-based analysis |
extractVIs | Extracts various vegetation indexes in a ROI |
FitDoubleLogBeck | A fit |
FitDoubleLogElmore | A fit |
FitDoubleLogGu | Fit a double logistic equation to a vector according to Gu et... |
FitDoubleLogKlHeavy | Fit a double logistic function to a vector according to... |
FitDoubleLogKlLight | Fit a double logistic equation to a vector according to... |
fitted.phenopix | Returns predicted values from 'phenopix' objects. |
getCoords | Extract coordinates (in pixels) of the exposure string from a... |
getExposure | Extract exposure from stardot (or similar) images |
get.options | Returns default options for function 'autoFilter'. |
greenClusters | Performs a cluster analysis on data in output from... |
greenExplore | Explore all possible fitting and theshold methods from the... |
greenProcess | Fit a curve and extract thresholds from vegetation index time... |
GuFit | Fit a double logistic equation to a time series according to... |
hydrodoy | Converts from and to hydrological day of year |
KlostermanFit | Fit a double logistic equation to a vector according to... |
matchExposure | Match exposures retrieved from the header of (stardot)... |
NDVI | Compute NDVI from Phenocam color indices |
PasteSeason | A plotting facility for seasonal data with multiple cycles |
PhenoBP | Extract breakpoints on a time series |
PhenoDeriv | Extract phenophases from a fitted equation with method... |
PhenoExtract | Generic function for the extraction of phenological... |
PhenoGu | Extract phenophases from a fitted equation according to Gu et... |
PhenoKl | Extract phenophases from a fitted equation according to... |
phenopix-package | A package for the processing of images of a vegetation cover |
PhenoPlot | A plotting function for phenological thresholds |
PhenoTrs | A phenophase method based on fixed thresholds |
plotBP | A function to plot results of function 'PhenoBP' |
plotExplore | Plot an object in output from the greenExplore function |
plot.phenopix | Plotting 'phenopix' objects. |
plotSpatial | Plot pixel-based analysis results from spatialGreen and... |
plotSum | A plotting facility to show the combination of uncertainty |
plotVI | Plot RGB DN, RGB indices and brightness |
print.phenopix | Print 'phenopix' objects. |
PrintROI | Print an already drawn region of interest |
resizeImage | Resize an image (and a tROI) to a given pixel resolution |
spatialFilter | Explore all possible fitting and theshold methods from the... |
spatialGreen | Process pixel-based greenness indexes |
SplineFit | A function to fit a smoothed spline to Phenological Data |
splitROI | Splits a ROI into multiple subrois for spatial analysis |
structureFolder | Fast structuration of a folder for phenopix process |
summarizePhases | An evolution of 'greenProcess' for the combination of... |
summary.phenopix | Summary of 'phenopix' objects. |
trainOCR | Extract a training dataset for OCR procedure |
update.phenopix | Update 'phenopix' objects. |
updateROI | Update pixels included in a ROI of different pixel size |
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