Files in phers
Calculate Phenotype Risk Scores
MD5
NEWS.md
NAMESPACE
DESCRIPTION
R/genetic_association.R
R/phers.R
R/weights.R
R/map.R
R/genetic_diagnosis.R
R/examples.R
R/utils.R
inst/extdata/geno_sample.log
inst/extdata/geno_sample.bed
inst/extdata/geno_sample-temporary.simfreq
inst/extdata/wgas.sim
inst/extdata/geno_sample.bim
inst/extdata/geno_sample.fam
inst/extdata/run_plink.R
tests/testthat.R
tests/testthat/test_genetic_association.R
tests/testthat/test_genetic_diagnosis.R
tests/testthat/test_map.R
tests/testthat/test_phers.R
tests/testthat/test_weights.R
tests/testthat/setup.R
tests/testthat/data/get_weights_prevalence_output.qs
tests/testthat/data/get_weights_prevalence_negative_output.qs
tests/testthat/data/geno_test.bed
tests/testthat/data/run_linear_dominant_output.qs
tests/testthat/data/get_weights_prevalence_precalc_output.qs
tests/testthat/data/get_weights_logistic_negative_output.qs
tests/testthat/data/get_genetic_associations_additive_output.qs
tests/testthat/data/get_residual_scores_output.qs
tests/testthat/data/get_weights_cox_output.qs
tests/testthat/data/run_linear_recessive_output.qs
tests/testthat/data/run_linear_additive_output.qs
tests/testthat/data/get_weights_logistic_output.qs
tests/testthat/data/get_weights_cox_negative_output.qs
tests/testthat/data/run_linear_genotypic_output.qs
tests/testthat/data/get_weights_loglinear_output.qs
tests/testthat/data/geno_test.fam
tests/testthat/data/geno_test.bim
data/icdSample.rda
data/diseaseDxIcdMap.rda
data/ICDPhecodeMap.rda
data/preCalcWeights.rda
data/diseaseHPOMap.rda
data/HPOPhecodeMap.rda
data/demoSample.rda
man/hpoPhecodeMap.Rd
man/getScores.Rd
man/getWeights.Rd
man/diseaseHpoMap.Rd
man/preCalcWeights.Rd
man/mapDiseaseToPhecode.Rd
man/getGeneticAssociations.Rd
man/getDxStatus.Rd
man/getPhecodeOccurrences.Rd
man/getResidualScores.Rd
man/demoSample.Rd
man/icdPhecodeMap.Rd
man/icdSample.Rd
man/diseaseDxIcdMap.Rd
