diseaseDxIcdMap: Mapping of diseases and diagnostic ICD codes

In phers: Calculate Phenotype Risk Scores

Mapping of diseases and diagnostic ICD codes

Description

This table provides a mapping between 27 Mendelian diseases and the corresponding ICD-9 and ICD-10 codes that indicate a genetic diagnosis.

Usage

diseaseDxIcdMap

Format

A data.table with the following columns:

• disease_id: Numeric vector of OMIM disease identifiers

• disease_name: Character vector of disease names

• icd: Character vector of ICD codes indicating a genetic diagnosis

• flag: Integer vector of the vocabulary of the ICD code (9: ICD-9-CM, 10: ICD-10-CM)

• icd_name: Character vector containing the description of each ICD code

See Also

getPhecodeOccurrences(), getDxStatus()

phers documentation built on March 31, 2023, 5:43 p.m.