Man pages for photosynthesis
Tools for Plant Ecophysiology & Modeling
| analyze_sensitivity | Running 2-parameter sensitivity analyses |
| aq_response | Non-rectangular hyperbolic model of light responses |
| A_supply | CO2 supply and demand function (mol / m^2 s) |
| bake | Leaf parameter temperature responses |
| baked-class | S3 class baked |
| bake_par | S3 class bake_par |
| calculated-parameters | Get default functions for calculated parameters in... |
| CO2_conductance | Conductance to CO2 (mol / m^2 / s) |
| compile_data | Compiling outputs from lists |
| compute_sensitivity | Computing measures of sensitivity |
| constants | S3 class constants |
| enviro_par | S3 class enviro_par |
| fit_aci_response | Fitting ACi curves |
| fit_aq_response | Fitting light responses of net CO2 assimilation |
| fit_aq_response2 | Fit photosynthetic light-response curves |
| fit_g_mc_variableJ | Fitting mesophyll conductance with the variable J method |
| fit_gs_model | Fitting stomatal conductance models |
| fit_hydra_vuln_curve | Fitting hydraulic vulnerability curves |
| fit_many | Fitting many functions across groups |
| fit_photosynthesis | Fit photosynthetic models with gas-exchange data |
| fit_PV_curve | Fitting pressure-volume curves |
| fit_r_light | Estimating light respiration |
| fit_r_light2 | Fit models to estimate light respiration (R_\mathrm{d}) |
| fit_t_response | Fitting temperature responses |
| FvCB | Farquhar-von Caemmerer-Berry (FvCB) C3 photosynthesis model |
| gs_models | Stomatal conductance models |
| J | J: Rate of electron transport (umol/m^2/s) |
| j_calculations | Inverse non-rectangular hyperbola for J_max calculation |
| leaf_par | S3 class leaf_par |
| make_parameters | Make lists of parameters for 'photosynthesis' |
| models | Get default model |
| parameter_names | Get vector of parameter names |
| photo_parameters | Input parameters to simulate C3 photosynthesis using... |
| photosynthesis | Simulate C3 photosynthesis |
| photosynthesis-package | 'photosynthesis' package |
| ppm2pa | Convert pressure from PPM to Pascals |
| print_graphs | Printing graphs to system |
| read_li6800 | Read a LI-COR file |
| read_licor | Read a LI-COR file |
| required_variables | Variables required for *photosynthesis* models |
| simulate_error | Simulate gas exchange data with measurement error |
| t_functions | Temperature response functions |
