API for phylotypr
Classifying DNA Sequences to Taxonomic Groupings
| Global functions | |
|---|---|
| base4_to_index | Source code |
| bootstrap_kmers | Source code |
| build_kmer_database | Man page Source code |
| calc_genus_conditional_prob | Source code |
| calc_word_specific_priors | Source code |
| calculate_log_probability | Source code |
| classify_bs | Source code |
| classify_sequence | Man page Source code |
| consensus_bs_class | Source code |
| detect_kmers | Source code |
| detect_kmers_across_sequences | Source code |
| filter_taxonomy | Man page Source code |
| genera_str_to_index | Source code |
| get_all_kmers | Source code |
| get_consensus | Source code |
| get_unique_genera | Source code |
| phylotypr_example | Man page Source code |
| print_taxonomy | Man page Source code |
| read_fasta | Man page Source code |
| read_taxonomy | Man page Source code |
| seq_to_base4 | Source code |
| trainset9_pds | Man page |
| trainset9_rdp | Man page |
| write_fasta | Man page Source code |
