NNLS_MF_Final: Perform matrix factorisation for phytoplankton pigments and...
In phytoclass: Estimate Chla Concentrations of Phytoplankton Groups
View source: R/NNLS_MF_Final.R
NNLS_MF_Final R Documentation
Perform matrix factorisation for phytoplankton pigments and pigments ratios
Description
Performs the non-negative matrix factorisation for given phytoplankton
pigments and pigment ratios, to attain an estimate of phytoplankton
class abundances.
Usage
NNLS_MF_Final(Fn, S, S_Chl, cm)
Arguments
Fn
xx
S
xx
S_Chl
xx
cm
xx
Details
Unlike NNLS_ML(), it also removes any weighting and normalisation, and
also multiplies relative abundances by chlorophyll values to determine
the biomass of phytoplankton groups.
phytoclass documentation built on April 4, 2025, 4:02 a.m.
R Package Documentation
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View source: R/NNLS_MF_Final.R
| NNLS_MF_Final | R Documentation |
Perform matrix factorisation for phytoplankton pigments and pigments ratios
Description
Performs the non-negative matrix factorisation for given phytoplankton pigments and pigment ratios, to attain an estimate of phytoplankton class abundances.
Usage
NNLS_MF_Final(Fn, S, S_Chl, cm)
Arguments
Fn |
xx |
S |
xx |
S_Chl |
xx |
cm |
xx |
Details
Unlike NNLS_ML(), it also removes any weighting and normalisation, and also multiplies relative abundances by chlorophyll values to determine the biomass of phytoplankton groups.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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