plsVarSel: Variable Selection in Partial Least Squares
Version 0.9.1

Interfaces and methods for variable selection in Partial Least Squares. The methods include filter methods, wrapper methods and embedded methods. Both regression and classification is supported.

Browse man pages Browse package API and functions Browse package files

AuthorKristian Hovde Liland, Tahir Mehmood, Solve Sæbø
Date of publication2016-10-13 00:33:31
MaintainerKristian Hovde Liland <kristian.liland@nmbu.no>
LicenseGPL (>= 2)
Version0.9.1
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("plsVarSel")

Man pages

bve_pls: Backward variable elimination PLS (BVE-PLS)
filterPLSR: Optimisation of filters for Partial Least Squares
ga_pls: Genetic algorithm combined with PLS regression (GA-PLS)
ipw_pls: Iterative predictor weighting PLS (IPW-PLS)
lda_from_pls: LDA/QDA classification from PLS model
lda_from_pls_cv: Cross-validated LDA/QDA classification from PLS model
mcuve_pls: Uninformative variable elimination in PLS (UVE-PLS)
mvrV: Multivariate regression function
myImagePlot: Matrix plotting
plsVarSel: Variable selection in Partial Least Squares
rep_pls: Regularized elimination procedure in PLS
setDA: Set chosen Discriminant Analysis
shaving: Repeated shaving of variables
simulate_classes: Simulate classes
spa_pls: Sub-window permutation analysis coupled with PLS (SwPA-PLS)
stpls: Soft-Threshold PLS (ST-PLS)
summary.mvrV: Summary method for stpls and trunc
truncation: Trunction PLS
VIP: Filter methods for variable selection with Partial Least...

Functions

ClassPerf Source code
CorrXY Source code
LW Man page Source code
Lenth Source code
MSEP Source code
MSEP.mvr Source code
Median Source code
PLSVarSelEnv Source code
PredPerf Source code
R2 Source code
R2.mvr Source code
RC Man page Source code
RMSEP Source code
RMSEP.mvr Source code
Rcal Source code
RcalP Source code
SR Man page Source code
VIP Man page Source code
bve_pls Man page Source code
cancorr Source code
createSmatrix Source code
delete.intercept Source code
evaluateX Source code
explvarV Source code
filterPLSR Man page Source code
ga_pls Man page Source code
getPLSVarSelEnv Source code
getplsEnv Source code
ipw_pls Man page Source code
lapplyFunc Source code
lda_from_pls Man page Source code
lda_from_pls_cv Man page Source code
lw_bestpar Source code
makeSmatrix Source code
mcuve_pls Man page Source code
monitor Source code
mvrCvV Source code
mvrV Man page Source code
mvrValstats Source code
myImagePlot Man page Source code
norm Source code
plot.shaved Man page Source code
plsEnv Source code
plsVarSel Man page
print.mvrV Source code
print.mvrVal Source code
print.shaved Man page Source code
putPLSVarSelEnv Source code
putplsEnv Source code
quant Source code
rep_pls Man page Source code
rmsep Source code
sMC Man page Source code
setDA Man page Source code
shaving Man page Source code
simplify Source code
simulate_classes Man page Source code
simulate_data Man page Source code
spa_pls Man page Source code
stpls Man page Source code
stpls.fit Source code
summary.mvrV Man page Source code
trunc_fit Source code
truncation Man page Source code

Files

inst
inst/CITATION
NAMESPACE
R
R/plsVarSel.R
R/trunc.R
R/SPA.R
R/filters.R
R/REP.R
R/GA.R
R/stpls.R
R/IPW.R
R/utilities.R
R/UVE.R
R/mvrV.R
R/lda_from_pls.R
R/shaving.R
R/BVE.R
README.md
MD5
DESCRIPTION
man
man/truncation.Rd
man/summary.mvrV.Rd
man/spa_pls.Rd
man/plsVarSel.Rd
man/mvrV.Rd
man/lda_from_pls.Rd
man/bve_pls.Rd
man/VIP.Rd
man/ga_pls.Rd
man/myImagePlot.Rd
man/shaving.Rd
man/simulate_classes.Rd
man/setDA.Rd
man/lda_from_pls_cv.Rd
man/rep_pls.Rd
man/mcuve_pls.Rd
man/stpls.Rd
man/filterPLSR.Rd
man/ipw_pls.Rd
plsVarSel documentation built on May 20, 2017, 12:04 a.m.