getcluster: Get Pseudo-Spectrum as peaks cluster based on pmd analysis.

In pmd: Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted Analysis and Reactomics Analysis

Description

Get Pseudo-Spectrum as peaks cluster based on pmd analysis.

Usage

getcluster(list, corcutoff = NULL, accuracy = 4)

Arguments

list	a list from getstd function
corcutoff	cutoff of the correlation coefficient, default NULL
accuracy	measured mass or mass to charge ratio in digits, default 4

Value

list with Pseudo-Spectrum index

See Also

getpaired,getstd,plotstd

Examples

data(spmeinvivo)
re <- getpaired(spmeinvivo)
re <- getstd(re)
cluster <- getcluster(re)

pmd documentation built on Jan. 22, 2021, 1:06 a.m.