psborrow2
Bayesian Dynamic Borrowing Analysis and Simulation

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106
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psborrow2: Bayesian Dynamic Borrowing Analysis and Simulation
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API

API for psborrow2
Bayesian Dynamic Borrowing Analysis and Simulation

Global functions
.analysis_obj Man page
.baseline_data_list Man page
.baseline_dataframe Man page
.baseline_object Man page
.bin_var Man page
.borrowing_full Man page
.borrowing_hierarchical_commensurate Man page
.borrowing_none Man page
.cont_var Man page
.covariate_class Man page
.datasim_cut_off Man page
.datasim_enrollment Man page
.datasim_event Man page
.datasim_fixed_external_data Man page
.datasim_object Man page
.mcmc_simulation_result Man page
.onAttach Source code
.outcome_bin_logistic Man page
.outcome_cont_normal Man page
.outcome_surv_exponential Man page
.outcome_surv_pem Man page
.outcome_surv_weibull_ph Man page
.prior_bernoulli Man page
.prior_beta Man page
.prior_cauchy Man page
.prior_exponential Man page
.prior_gamma Man page
.prior_half_cauchy Man page
.prior_half_normal Man page
.prior_normal Man page
.prior_poisson Man page
.sim_borrowing_list Man page
.sim_covariate_list Man page
.sim_covariates Man page
.sim_data_list Man page
.sim_outcome_list Man page
.sim_samplesize Man page
.sim_treatment_list Man page
.simulation_obj Man page
.treatment_class Man page
.uniform_prior Man page
Analysis-class Man page
BaselineDataFrame-class Man page
BaselineDataList-class Man page
BaselineObject-class Man page
BinaryOutcome-class Man page
Borrowing-class Man page
BorrowingFull-class Man page
BorrowingHierarchicalCommensurate-class Man page
BorrowingNone-class Man page
ContinuousOutcome-class Man page
Covariates-class Man page
DataSimCutOff-class Man page
DataSimEnrollment-class Man page
DataSimEvent-class Man page
DataSimFixedExternalData-class Man page
DataSimObject-class Man page
MCMCSimulationResult-class Man page
Outcome-class Man page
OutcomeBinaryLogistic-class Man page
OutcomeContinuousNormal-class Man page
OutcomeSurvExponential-class Man page
OutcomeSurvPEM-class Man page
OutcomeSurvWeibullPH-class Man page
Prior-class Man page
PriorBernoulli-class Man page
PriorBeta-class Man page
PriorCauchy-class Man page
PriorExponential-class Man page
PriorGamma-class Man page
PriorHalfCauchy-class Man page
PriorHalfNormal-class Man page
PriorNormal-class Man page
PriorPoisson-class Man page
SimBorrowingList-class Man page
SimCovariateList-class Man page
SimCovariates-class Man page
SimDataList-class Man page
SimOutcomeList-class Man page
SimSampleSize-class Man page
SimTreatmentList-class Man page
SimVar-class Man page
SimVarBin-class Man page
SimVarCont-class Man page
Simulation-class Man page
TimeToEvent-class Man page
Treatment-class Man page
UniformPrior-class Man page
add_covariates Man page Source code
add_covariates_and_weights Source code
as.data.frame.BaselineDataList Man page Source code
as_data_frame Man page
baseline_covariates Man page Source code
bernoulli_prior Man page Source code
beta_prior Man page Source code
bin_var Man page Source code
binary_cutoff Man page Source code
borrowing_details Man page Source code
borrowing_full Man page Source code
borrowing_hierarchical_commensurate Man page Source code
borrowing_none Man page Source code
build_model_string Man page Source code
c Man page
c,SimDataList-method Man page
cast_mat_to_long_pem Source code
cauchy_prior Man page Source code
cbind.BaselineDataFrame Source code
check_cmdstan Man page Source code
check_cmdstanr Man page Source code
check_data_matrix_has_columns Man page Source code
check_fixed_external_data Man page Source code
cont_var Man page Source code
covariance_matrix Man page Source code
create_alpha_string Man page
create_alpha_string,Borrowing-method Man page
create_alpha_string,BorrowingHierarchicalCommensurate-method Man page
create_analysis_obj Man page Source code
create_baseline_object Man page Source code
create_data_matrix Man page Source code
create_data_simulation Man page Source code
create_event_dist Man page Source code
create_simulation_obj Man page Source code
create_tau_string Man page
create_tau_string,Borrowing-method Man page
create_tau_string,BorrowingHierarchicalCommensurate-method Man page
custom_enrollment Man page Source code
cut_off_after_events Man page Source code
cut_off_after_first Man page Source code
cut_off_after_last Man page Source code
cut_off_funs Man page
cut_off_none Man page Source code
enrollment_constant Man page Source code
eval_constraints Man page
eval_constraints,Prior-method Man page
example_matrix Man page
example_surv Man page
exp_surv_dist Man page Source code
exponential_prior Man page Source code
gamma_prior Man page Source code
generate Man page
generate,BaselineObject-method Man page
generate,DataSimObject-method Man page
generate.BaselineObject Source code
generate.DataSimObject Source code
get_cmd_stan_models Man page
get_cmd_stan_models,MCMCSimulationResult-method Man page
get_covariate_constraints Source code
get_data Man page
get_data,SimDataList-method Man page
get_prior_string Source code
get_prior_string_covariates Man page Source code
get_quantiles Man page Source code
get_results Man page
get_results,MCMCSimulationResult-method Man page
get_stan_code Man page
get_stan_code,Analysis-method Man page
get_vars Man page
get_vars,Analysis-method Man page
get_vars,BaselineObject-method Man page
get_vars,BinaryOutcome-method Man page
get_vars,Borrowing-method Man page
get_vars,ContinuousOutcome-method Man page
get_vars,Covariates-method Man page
get_vars,NULL-method Man page
get_vars,SimBorrowingList-method Man page
get_vars,SimCovariateList-method Man page
get_vars,SimOutcomeList-method Man page
get_vars,SimTreatmentList-method Man page
get_vars,Simulation-method Man page
get_vars,TimeToEvent-method Man page
get_vars,Treatment-method Man page
h_glue Source code
half_cauchy_prior Man page Source code
half_normal_prior Man page Source code
is_cmdstanr_available Source code
load_and_interpolate_stan_model Man page
load_stan_file Man page Source code
logistic_bin_outcome Man page Source code
make_analysis_object_list Source code
make_one_dataset Source code
mcmc_sample Man page
mcmc_sample,ANY-method Man page
mcmc_sample,Analysis-method Man page
mcmc_sample,Simulation-method Man page
normal_prior Man page Source code
null_event_dist Man page Source code
outcome_bin_logistic Man page Source code
outcome_cont_normal Man page Source code
outcome_surv_exponential Man page Source code
outcome_surv_pem Man page Source code
outcome_surv_weibull_ph Man page Source code
parse_constraint Source code
plot Man page
plot,Prior,missing-method Man page
plot,PriorBernoulli,missing-method Man page
plot,PriorBeta,missing-method Man page
plot,PriorCauchy,missing-method Man page
plot,PriorExponential,missing-method Man page
plot,PriorGamma,missing-method Man page
plot,PriorHalfCauchy,missing-method Man page
plot,PriorHalfNormal,missing-method Man page
plot,PriorNormal,missing-method Man page
plot,PriorPoisson,missing-method Man page
plot,UniformPrior,missing-method Man page
plot_pdf Man page Source code
plot_pmf Man page Source code
poisson_prior Man page Source code
possible_data_sim_vars Man page Source code
prior_bernoulli Man page Source code
prior_beta Man page Source code
prior_cauchy Man page Source code
prior_exponential Man page Source code
prior_gamma Man page Source code
prior_half_cauchy Man page Source code
prior_half_normal Man page Source code
prior_normal Man page Source code
prior_poisson Man page Source code
psborrow2 Man page
psborrow2-package Man page
rename_draws_covariates Man page Source code
set_cut_off Man page Source code
set_dropout Man page Source code
set_enrollment Man page Source code
set_transformations Man page
set_transformations,BaselineObject-method Man page
show_guide Man page
show_guide,Simulation-method Man page
sim_borrowing_list Man page Source code
sim_covariate_list Man page Source code
sim_covariates Man page Source code
sim_covariates_summ Man page Source code
sim_data_list Man page Source code
sim_estimate_bias Source code
sim_estimate_effect_variance Source code
sim_estimate_mse Source code
sim_is_null_effect_covered Source code
sim_is_true_effect_covered Source code
sim_outcome_list Man page Source code
sim_samplesize Man page Source code
sim_treatment_list Man page Source code
treatment_details Man page Source code
trim_cols Man page
trim_cols,Borrowing-method Man page
trim_cols,BorrowingHierarchicalCommensurate-method Man page
trim_data_matrix Source code
trim_rows Man page
trim_rows,Borrowing-method Man page
trim_rows,BorrowingNone-method Man page
uniform_prior Man page Source code
variable_dictionary Man page Source code
weib_ph_surv_dist Man page Source code
psborrow2 documentation built on April 4, 2025, 12:37 a.m.

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