Man pages for psfmi
Prediction Model Pooling, Selection and Performance Evaluation Across Multiply Imputed Datasets

andersonData from a placebo-controlled RCT with leukemia patients
aortadisDataset of patients with a aortadissection
bmdData of a non-experimental study in more than 300 elderly...
boot_MIBootstrap validation in Multiply Imputed datasets
bw_singlePredictor selection function for backward selection of Linear...
chlrformData about concentration of ß2-microglobuline in urine as...
chol_longLong dataset of persons from the The Amsterdam Growth and...
chol_wideWide dataset of persons from the The Amsterdam Growth and...
clean_PFunction to clean variables
coxph_bwPredictor selection function for backward selection of Cox...
coxph_fwPredictor selection function for forward selection of Cox...
cv_MICross-validation in Multiply Imputed datasets
cv_MI_RRCross-validation in Multiply Imputed datasets
day2_dataset4_miDataset of low back pain patients with missing values
glm_bwFunction for backward selection of Linear and Logistic...
glm_fwFunction for forward selection of Linear and Logistic...
hipstudyDataset of elderly patients with a hip fracture
hipstudy_externalExternal Dataset of elderly patients with a hip fracture
hoorn_basicDataset of the Hoorn Study
hoslem_testCalculates the Hosmer and Lemeshow goodness of fit test.
infarctData of a patient-control study regarding the relationship...
ipdna_mdExample dataset for the psfmi_mm function
km_estimatesKaplan-Meier risk estimates for Net Reclassification Index...
km_fitKaplan-Meier (KM) estimate at specific time point
lbpmicoxExample dataset for psfmi_coxr function
lbpmi_extvalExample dataset of Low Back Pain Patients for external...
lbpmilrExample dataset for psfmi_lr function
lbpmilr_devExample dataset for mivalext_lr function
lbp_origExample dataset for psfmi_perform function, method boot_MI
lungvolumeData of the development of lung and heartvolume of unborn...
mammacaData of a study among women with breast cancer
mean_auc_logFunction to calulate mean auc values
menData of 613 patients with meningitis
MI_bootBootstrap validation in Multiply Imputed datasets
miceImpWrapper function around mice
MI_cv_naiveNaive method for Cross-validation in Multiply Imputed...
mivalext_lrExternal Validation of logistic prediction models in multiply...
nri_coxNet Reclassification Index for Cox Regression Models
nri_estCalculation of Net Reclassification Index measures
pool_aucCalculates the pooled C-statistic (Area Under the ROC Curve)...
pool_compare_modelsCompare the fit and performance of prediction models across...
pool_D2Combines the Chi Square statistics across Multiply Imputed...
pool_D4Pools the Likelihood Ratio tests across Multiply Imputed...
pool_intadjProvides pooled adjusted intercept after shrinkage of pooled...
pool_performancePooling performance measures across multiply imputed datasets
pool_performance_internalPooling performance measures over multiply imputed datasets
pool_reclassificationFunction to pool NRI measures over Multiply Imputed datasets
pool_RRFunction to combine estimates by using Rubin's Rules
psfmi_coxrPooling and Predictor selection function for backward or...
psfmi_coxr_bwBackward selection of Cox regression models in multiply...
psfmi_coxr_fwForward selection of Cox regression models across multiply...
psfmi_lmPooling and Predictor selection function for backward or...
psfmi_lm_bwBackward selection of Linear regression models across...
psfmi_lm_fwForward selection of Linear regression models across multiply...
psfmi_lrPooling and Predictor selection function for backward or...
psfmi_lr_bwBackward selection of Logistic regression models in multiply...
psfmi_lr_fwForward selection of Logistic regression models in multiply...
psfmi_mmPooling and Predictor selection function for multilevel...
psfmi_mm_multiparmMultiparameter pooling methods called by psfmi_mm
psfmi_performInternal validation and performance of logistic prediction...
psfmi_stabFunction to evaluate bootstrap predictor and model stability...
psfmi_validateInternal validation and performance of logistic prediction...
risk_coxphRisk calculation at specific time point for Cox model
RR_diff_propFunction to apply RR to pool difference of NRI and AUC values
rsq_nagelNagelkerke's R-square calculation for logistic regression /...
rsq_survR-square calculation for Cox regression models
sbp_ageDataset with blood pressure measurements
sbp_qasDataset with blood pressure measurements
scaled_brierCalculates the scaled Brier score
smokingSurvival data about smoking
stab_singleFunction to evaluate bootstrap predictor and model stability.
weightDataset of persons from the The Amsterdam Growth and Health...
psfmi documentation built on July 9, 2023, 7:02 p.m.