This R package contains open source implementations of several p-value weighting methods, including Spjotvoll, exponential and Bayes weights. These are methods for improving power in multiple testing via the use of prior information.

Install the latest version of this package by entering the following in R:

`install.packages("pweight")`

Author | Edgar Dobriban [aut, cre], Kristen Fortney [aut] |

Date of publication | 2015-07-29 11:08:38 |

Maintainer | Edgar Dobriban <dobriban@stanford.edu> |

License | GPL-3 |

Version | 0.0.1 |

https://github.com/dobriban/pweight |

**bayes_weights:** Bayes p-value weights

**c_1:** Find the location of the smaller maximum of the generic term...

**exp_weights:** Exponential p-value weights

**find_crossing:** find the crossing point of the two competing maxima

**g_fun:** compute the dual constraint function: 1 if lambda <= l_prime,...

**iGWAS:** informed Genome-Wide Association Study

**pweight:** pweight: P-value weighting in multiple testing.

**spjotvoll_weights:** Spjotvoll p-value weights

inst

inst/doc

inst/doc/pweight-basics.Rmd

inst/doc/iGWAS-DataExample.html

inst/doc/iGWAS-DataExample.Rmd

inst/doc/pweight-basics.R
inst/doc/pweight-basics.html

inst/doc/iGWAS-DataExample.R
tests

tests/spjotvoll_weights_tests.R
tests/exp_weights_tests.R
tests/iGWAS_tests.R
tests/bayes_weights_tests.R
NAMESPACE

R

R/spjotvoll_weights.R
R/pweight.R
R/onAttach.R
R/c_1.R
R/find_crossing.R
R/exp_weights.R
R/bayes_weights.R
R/iGWAS.R
R/g_fun.R
vignettes

vignettes/pweight-basics.Rmd

vignettes/iGWAS-DataExample.Rmd

vignettes/weighted.bib

README.md

MD5

build

build/vignette.rds

DESCRIPTION

man

man/find_crossing.Rd
man/exp_weights.Rd
man/g_fun.Rd
man/c_1.Rd
man/spjotvoll_weights.Rd
man/bayes_weights.Rd
man/iGWAS.Rd
man/pweight.Rd
Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.