pweight: P-Value Weighting
Version 0.0.1

This R package contains open source implementations of several p-value weighting methods, including Spjotvoll, exponential and Bayes weights. These are methods for improving power in multiple testing via the use of prior information.

AuthorEdgar Dobriban [aut, cre], Kristen Fortney [aut]
Date of publication2015-07-29 11:08:38
MaintainerEdgar Dobriban <dobriban@stanford.edu>
LicenseGPL-3
Version0.0.1
URL https://github.com/dobriban/pweight
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("pweight")

Getting started

README.md
iGWAS example - Coronary Artery Disease"
Pweight Basics"

Popular man pages

bayes_weights: Bayes p-value weights
exp_weights: Exponential p-value weights
find_crossing: find the crossing point of the two competing maxima
g_fun: compute the dual constraint function: 1 if lambda <= l_prime,...
iGWAS: informed Genome-Wide Association Study
pweight: pweight: P-value weighting in multiple testing.
spjotvoll_weights: Spjotvoll p-value weights
See all...

All man pages Function index File listing

Man pages

bayes_weights: Bayes p-value weights
c_1: Find the location of the smaller maximum of the generic term...
exp_weights: Exponential p-value weights
find_crossing: find the crossing point of the two competing maxima
g_fun: compute the dual constraint function: 1 if lambda <= l_prime,...
iGWAS: informed Genome-Wide Association Study
pweight: pweight: P-value weighting in multiple testing.
spjotvoll_weights: Spjotvoll p-value weights

Functions

bayes_weights Man page Source code
c_1 Man page Source code
exp_weights Man page Source code
find_crossing Man page Source code
g_fun Man page Source code
iGWAS Man page Source code
onAttach Source code
pweight Man page
pweight-package Man page
spjotvoll_weights Man page Source code

Files

inst
inst/doc
inst/doc/pweight-basics.Rmd
inst/doc/iGWAS-DataExample.html
inst/doc/iGWAS-DataExample.Rmd
inst/doc/pweight-basics.R
inst/doc/pweight-basics.html
inst/doc/iGWAS-DataExample.R
tests
tests/spjotvoll_weights_tests.R
tests/exp_weights_tests.R
tests/iGWAS_tests.R
tests/bayes_weights_tests.R
NAMESPACE
R
R/spjotvoll_weights.R
R/pweight.R
R/onAttach.R
R/c_1.R
R/find_crossing.R
R/exp_weights.R
R/bayes_weights.R
R/iGWAS.R
R/g_fun.R
vignettes
vignettes/pweight-basics.Rmd
vignettes/iGWAS-DataExample.Rmd
vignettes/weighted.bib
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/find_crossing.Rd
man/exp_weights.Rd
man/g_fun.Rd
man/c_1.Rd
man/spjotvoll_weights.Rd
man/bayes_weights.Rd
man/iGWAS.Rd
man/pweight.Rd
pweight documentation built on May 20, 2017, 12:49 a.m.

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