qcQpcr: Histone ChIP-Seq qPCR Analyzer
In qcQpcr: Histone ChIP-Seq qPCR Analyzer
Description
Usage
Arguments
Author(s)
Examples
Description
Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software <http://www.thermofisher.com/ca/en/home/life-science/pcr/real-time-pcr/real-time-pcr-instruments/viia-7-real-time-pcr-system/viia-7-software.html>). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC).
Usage
1
qcQpcr(xx, Name)
Arguments
xx
'Your Data Set'
Name
'.... Title for you graph, (ie: Projects name and date)'
Author(s)
Alireza Lorzadeh
Examples
1
2
3
library(ggplot2)
data(SampleTest)
qcQpcr(SampleTest,'Title for your graph')
qcQpcr documentation built on May 2, 2019, 11:12 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Author(s) Examples
Description
Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software <http://www.thermofisher.com/ca/en/home/life-science/pcr/real-time-pcr/real-time-pcr-instruments/viia-7-real-time-pcr-system/viia-7-software.html>). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC).
Usage
1 | qcQpcr(xx, Name)
|
Arguments
xx |
'Your Data Set' |
Name |
'.... Title for you graph, (ie: Projects name and date)' |
Author(s)
Alireza Lorzadeh
Examples
1 2 3 | library(ggplot2)
data(SampleTest)
qcQpcr(SampleTest,'Title for your graph')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.