qgraph: Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation

Can be used to visualize data as networks as well as provides an interface for visualizing weighted graphical models.

AuthorSacha Epskamp, Giulio Costantini, Jonas Haslbeck, Angelique O. J. Cramer, Lourens J. Waldorp, Verena D. Schmittmann and Denny Borsboom
Date of publication2016-11-22 16:57:12
MaintainerSacha Epskamp <mail@sachaepskamp.com>
LicenseGPL-2
Version1.4.1
http://sachaepskamp.com/qgraph

View on CRAN

Man pages

as.igraph: Converts qgraph object to igraph object.

averageLayout: Computes an average layout over several graphs

big5: Big 5 dataset

big5groups: Big 5 groups list

CentAndClusfuns: Centrality and Clustering plots and tables

centrality: Centrality statistics of graphs

centrality_auto: Automatic centrality statistics of graphs

clustcoef_auto: Local clustering coefficients.

cor_auto: Automatically compute an apppropriate correlation matrix

EBICglasso: Compute Gaussian graphical model using graphical lasso based...

FDRnetwork: Model selection using local False Discovery Rate

findGraph: Search for optimal correlation or partial correlation network

getWmat: Obtain a weights matrix

ggmFit: Obtain fit measures of a Gaussian graphical model

makeBW: A qgraph plot can be understood in black and white

mat2vec: Weights matrix to vector

pathways: Highlight shortest pathways in a network

plot.qgraph: Plot method for "qgraph"

print.qgraph: Print edgelist

qgraph: qgraph

qgraph.animate: Animate a growing network

qgraphAnnotate: Annotates a qgraph object with mouseover tooltips in a HTML...

qgraph.cfa: CFA using Structural Equation Modelling

qgraph_efa: qgraph.efa

qgraph.gui: Graphical user interface for qgraph

qgraph.lavaan: qgraph: Structural Equation Modelling

qgraph.layout.fruchtermanreingold: qgraph.layout.fruchtermanreingold

qgraph_loadings: qgraph.loadings

qgraphMixed: Plots a mixed graph with both directed and undirected edges.

qgraph.panel: qgraph.panel

qgraph_pca: qgraph.pca

qgraph_sem: qgraph: Structural Equation Modelling

qgraph.semModel: qgraph: SEM model pathdiagram

qgraph_svg: qgraph.svg

smallworldIndex: Small-world index of unweighted graph

smallworldness: Compute the small-worldness index.

summary.qgraph: Summary method for "qgraph"

VARglm: Computes a vector autoregressive lag-1 model using GLM

wi2net: Converts precision matrix to partial correlation matrix

Files in this package

qgraph
qgraph/COPYING
qgraph/inst
qgraph/inst/COPYING
qgraph/inst/CITATION
qgraph/inst/COPYRIGHTS
qgraph/src
qgraph/src/layout.c
qgraph/NAMESPACE
qgraph/NEWS
qgraph/data
qgraph/data/big5.RData
qgraph/data/big5groups.RData
qgraph/R
qgraph/R/IntInNode.r
qgraph/R/cor_auto.R qgraph/R/qgraph_cfa.R qgraph/R/qgraphD3.R qgraph/R/Fade.R qgraph/R/drawEdge.R qgraph/R/makeBW.R qgraph/R/DrawArrow.R qgraph/R/centralityPlot.R qgraph/R/addTrans.R qgraph/R/fixnames.R qgraph/R/averageLayout.R qgraph/R/glasso_methods.R qgraph/R/qgraph.R qgraph/R/getArgs.R qgraph/R/layout.R qgraph/R/qgraphGUI.R qgraph/R/clusteringPlot.R qgraph/R/sign0.R qgraph/R/pathways.R qgraph/R/centralityTable.R qgraph/R/centralityFunctions.R qgraph/R/ggmFit.R qgraph/R/mixCols.R qgraph/R/drawNode.R qgraph/R/qgraphAnnotate.R qgraph/R/logGaus.R qgraph/R/centrality.R qgraph/R/PLOT.R qgraph/R/qgraph_sem.R qgraph/R/qgraph.lavaan.R qgraph/R/printplotsummary.R qgraph/R/pie2.R qgraph/R/addTitle.R qgraph/R/mixGraphs.R qgraph/R/qgraph_loadings.R qgraph/R/mapusr2in.R qgraph/R/qgraph_Efa.R qgraph/R/qgraph_arrow.R qgraph/R/qgraph_growth.R qgraph/R/qgraph_pca.R qgraph/R/EBICgraph.R qgraph/R/igraphConversion.R qgraph/R/XKCD.R qgraph/R/qgraphBoot.R qgraph/R/smallworldIndex.R qgraph/R/SelfLoop.R qgraph/R/findGraph.R qgraph/R/getWmat.R qgraph/R/toJSONarray.R qgraph/R/qgraph_mixed.R qgraph/R/clusteringTable.R qgraph/R/qgraph.rack.R qgraph/R/palettes.R qgraph/R/scale2.R qgraph/R/FDRnetwork.R qgraph/R/isColor.R qgraph/R/00PolyShapes.R qgraph/R/qgraph.panel.R qgraph/R/VARglm.R qgraph/R/qgraph_semModel.R qgraph/R/Cent2EdgeNode.R qgraph/R/qgraph_svg.R
qgraph/MD5
qgraph/README
qgraph/DESCRIPTION
qgraph/COPYRIGHTS
qgraph/man
qgraph/man/qgraph_svg.Rd qgraph/man/print.qgraph.Rd qgraph/man/pathways.Rd qgraph/man/averageLayout.Rd qgraph/man/EBICglasso.Rd qgraph/man/ggmFit.Rd qgraph/man/CentAndClusfuns.Rd qgraph/man/qgraph_loadings.Rd qgraph/man/big5.Rd qgraph/man/as.igraph.Rd qgraph/man/qgraph.cfa.Rd qgraph/man/qgraphAnnotate.Rd qgraph/man/wi2net.Rd qgraph/man/qgraph.semModel.Rd qgraph/man/qgraph_sem.Rd qgraph/man/smallworldness.Rd qgraph/man/qgraph.Rd qgraph/man/qgraph_efa.Rd qgraph/man/mat2vec.Rd qgraph/man/qgraph.panel.Rd qgraph/man/qgraph.gui.Rd qgraph/man/centrality_auto.Rd qgraph/man/makeBW.Rd qgraph/man/clustcoef_auto.Rd qgraph/man/qgraph_pca.Rd qgraph/man/FDRnetwork.Rd qgraph/man/getWmat.Rd qgraph/man/VARglm.Rd qgraph/man/smallworldIndex.Rd qgraph/man/findGraph.Rd qgraph/man/big5groups.Rd qgraph/man/cor_auto.Rd qgraph/man/plot.qgraph.Rd qgraph/man/qgraph.layout.fruchtermanreingold.Rd qgraph/man/centrality.Rd qgraph/man/qgraph.lavaan.Rd qgraph/man/summary.qgraph.Rd qgraph/man/qgraphMixed.Rd qgraph/man/qgraph.animate.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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