qtlcharts: Interactive Graphics for QTL Experiments

Web-based interactive charts (using D3.js) for the analysis of experimental crosses to identify genetic loci (quantitative trait loci, QTL) contributing to variation in quantitative traits.

AuthorKarl W Broman [aut, cre], Michael Bostock [ctb, cph] (d3.js library in htmlwidgets/lib, http://d3js.org), Justin Palmer [ctb, cph] (d3.tip library in htmlwidgets/lib, https://github.com/caged/d3-tip), Cynthia Brewer [cph] (ColorBrewer library in htmlwidgets/lib, http://colorbrewer2.org), Mark Harrower [cph] (ColorBrewer library in htmlwidgets/lib, http://colorbrewer2.org), The Pennsylvania State University [cph] (ColorBrewer library in htmlwidgets/lib, http://colorbrewer2.org), jQuery Foundation [cph] (jQuery library in htmlwidgets/lib, http://jquery.com), jQuery contributors [ctb] (jQuery library in htmlwidgets/lib; see https://github.com/jquery/jquery/blob/master/AUTHORS.txt), jQuery UI contributors [ctb] (jQuery UI library in htmlwidgets/lib; see http://jqueryui.com/about)
Date of publication2016-06-28 23:43:10
MaintainerKarl W Broman <kbroman@biostat.wisc.edu>
LicenseGPL-3 | file LICENSE
Version0.7-8
http://kbroman.org/qtlcharts

View on CRAN

Files in this package

qtlcharts
qtlcharts/inst
qtlcharts/inst/htmlwidgets
qtlcharts/inst/htmlwidgets/iboxplot.yaml
qtlcharts/inst/htmlwidgets/iplotScantwo.js
qtlcharts/inst/htmlwidgets/scat2scat.js
qtlcharts/inst/htmlwidgets/iplotCorr.coffee
qtlcharts/inst/htmlwidgets/itriplot.coffee
qtlcharts/inst/htmlwidgets/iplotScanone.js
qtlcharts/inst/htmlwidgets/lib
qtlcharts/inst/htmlwidgets/lib/d3-tip
qtlcharts/inst/htmlwidgets/lib/d3-tip/index-min.js
qtlcharts/inst/htmlwidgets/lib/d3-tip/ReadMe.md
qtlcharts/inst/htmlwidgets/lib/d3-tip/LICENSE
qtlcharts/inst/htmlwidgets/lib/jquery-ui
qtlcharts/inst/htmlwidgets/lib/jquery-ui/LICENSE.txt
qtlcharts/inst/htmlwidgets/lib/jquery-ui/jquery-ui.min.js
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/theme.css
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/jquery-ui.min.css
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-icons_222222_256x240.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-bg_flat_75_ffffff_40x100.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-bg_glass_75_dadada_1x400.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/animated-overlay.gif
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-icons_2e83ff_256x240.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-longname.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-bg_glass_65_ffffff_1x400.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-bg_flat_0_aaaaaa_40x100.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-bg_glass_95_fef1ec_1x400.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-icons_cd0a0a_256x240.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-bg_glass_75_e6e6e6_1x400.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-icons_888888_256x240.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-icons_454545_256x240.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/images/ui-bg_glass_55_fbf9ee_1x400.png
qtlcharts/inst/htmlwidgets/lib/jquery-ui/themes/smoothness/jquery-ui.css
qtlcharts/inst/htmlwidgets/lib/jquery
qtlcharts/inst/htmlwidgets/lib/jquery/MIT-LICENSE.txt
qtlcharts/inst/htmlwidgets/lib/jquery/dist
qtlcharts/inst/htmlwidgets/lib/jquery/dist/jquery.min.js
qtlcharts/inst/htmlwidgets/lib/d3panels
qtlcharts/inst/htmlwidgets/lib/d3panels/License.md
qtlcharts/inst/htmlwidgets/lib/d3panels/ReadMe.md
qtlcharts/inst/htmlwidgets/lib/d3panels/d3panels.min.css
qtlcharts/inst/htmlwidgets/lib/d3panels/d3panels.min.js
qtlcharts/inst/htmlwidgets/lib/colorbrewer
qtlcharts/inst/htmlwidgets/lib/colorbrewer/ReadMe.md
qtlcharts/inst/htmlwidgets/lib/colorbrewer/colorbrewer.css
qtlcharts/inst/htmlwidgets/lib/colorbrewer/colorbrewer.js
qtlcharts/inst/htmlwidgets/lib/colorbrewer/LICENSE
qtlcharts/inst/htmlwidgets/lib/qtlcharts
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotScantwo.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/scat2scat.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotScanone_pxg.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotMScanone_eff.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotScanone_noeff.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotCorr.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/itriplot.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/charts.css
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotMScanone_noeff.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iboxplot.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotMap.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/idotplot.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplot.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotMap.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplot.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotScanone_noeff.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iheatmap.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotCorr.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotRF.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotCurves.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotCorr_noscat.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotRF.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotMScanone_eff.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iboxplot.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/itriplot.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/scat2scat.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotScanone_ci.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotScanone_ci.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotCurves.js
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotScantwo.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotCorr_noscat.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/idotplot.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iheatmap.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotMScanone_noeff.coffee
qtlcharts/inst/htmlwidgets/lib/qtlcharts/iplotScanone_pxg.coffee
qtlcharts/inst/htmlwidgets/lib/d3
qtlcharts/inst/htmlwidgets/lib/d3/ReadMe.md
qtlcharts/inst/htmlwidgets/lib/d3/d3.min.js
qtlcharts/inst/htmlwidgets/lib/d3/LICENSE
qtlcharts/inst/htmlwidgets/iplotCorr.yaml
qtlcharts/inst/htmlwidgets/iboxplot.coffee
qtlcharts/inst/htmlwidgets/iplotMap.coffee
qtlcharts/inst/htmlwidgets/iplotScantwo.yaml
qtlcharts/inst/htmlwidgets/idotplot.js
qtlcharts/inst/htmlwidgets/iplotRF.yaml
qtlcharts/inst/htmlwidgets/iplot.js
qtlcharts/inst/htmlwidgets/iplotMap.yaml
qtlcharts/inst/htmlwidgets/iplotMScanone.js
qtlcharts/inst/htmlwidgets/iplotMScanone.coffee
qtlcharts/inst/htmlwidgets/iplotMap.js
qtlcharts/inst/htmlwidgets/iplot.coffee
qtlcharts/inst/htmlwidgets/iheatmap.js
qtlcharts/inst/htmlwidgets/iplotCorr.js
qtlcharts/inst/htmlwidgets/iplotScanone.yaml
qtlcharts/inst/htmlwidgets/iplotScanone.coffee
qtlcharts/inst/htmlwidgets/iplotRF.coffee
qtlcharts/inst/htmlwidgets/iplotCurves.coffee
qtlcharts/inst/htmlwidgets/scat2scat.yaml
qtlcharts/inst/htmlwidgets/iplotRF.js
qtlcharts/inst/htmlwidgets/iboxplot.js
qtlcharts/inst/htmlwidgets/itriplot.js
qtlcharts/inst/htmlwidgets/scat2scat.coffee
qtlcharts/inst/htmlwidgets/itriplot.yaml
qtlcharts/inst/htmlwidgets/iplotCurves.yaml
qtlcharts/inst/htmlwidgets/iplotCurves.js
qtlcharts/inst/htmlwidgets/iplotScantwo.coffee
qtlcharts/inst/htmlwidgets/idotplot.coffee
qtlcharts/inst/htmlwidgets/iheatmap.coffee
qtlcharts/inst/htmlwidgets/iheatmap.yaml
qtlcharts/inst/htmlwidgets/idotplot.yaml
qtlcharts/inst/htmlwidgets/iplotMScanone.yaml
qtlcharts/inst/htmlwidgets/iplot.yaml
qtlcharts/inst/CITATION
qtlcharts/inst/ToDo.md
qtlcharts/inst/NEWS.md
qtlcharts/inst/ReadMe.md
qtlcharts/inst/LICENSE
qtlcharts/tests
qtlcharts/tests/Rmdtest.R
qtlcharts/tests/Rmdtest
qtlcharts/tests/Rmdtest/iplotRF.Rmd
qtlcharts/tests/Rmdtest/itriplot.Rmd
qtlcharts/tests/Rmdtest/iplotCorr.Rmd
qtlcharts/tests/Rmdtest/iplotScanone.Rmd
qtlcharts/tests/Rmdtest/iheatmap.Rmd
qtlcharts/tests/Rmdtest/iplotMap.Rmd
qtlcharts/tests/Rmdtest/scat2scat.Rmd
qtlcharts/tests/Rmdtest/iplotMScanone.Rmd
qtlcharts/tests/Rmdtest/iplot.Rmd
qtlcharts/tests/Rmdtest/iplotScantwo.Rmd
qtlcharts/tests/Rmdtest/iplotCurves_justcurves.Rmd
qtlcharts/tests/Rmdtest/iplotCurves.Rmd
qtlcharts/tests/Rmdtest/iplotPXG.Rmd
qtlcharts/tests/Rmdtest/Rmdtest.Rmd
qtlcharts/tests/Rmdtest/iboxplot.Rmd
qtlcharts/tests/Rmdtest/idotplot.Rmd
qtlcharts/tests/htmltest
qtlcharts/tests/htmltest/iboxplot.R
qtlcharts/tests/htmltest/iplotMap.R
qtlcharts/tests/htmltest/iplot.R
qtlcharts/tests/htmltest/idotplot.R
qtlcharts/tests/htmltest/scat2scat.R
qtlcharts/tests/htmltest/iheatmap.R
qtlcharts/tests/htmltest/iplotScantwo.R
qtlcharts/tests/htmltest/itriplot.R
qtlcharts/tests/htmltest/iplotPXG.R
qtlcharts/tests/htmltest/iplotScanone.R
qtlcharts/tests/htmltest/iplotCurves_justcurves.R
qtlcharts/tests/htmltest/iplotCorr.R
qtlcharts/tests/htmltest/iplotCurves.R
qtlcharts/tests/htmltest/iplotMScanone.R
qtlcharts/tests/htmltest/iplotRF.R
qtlcharts/tests/htmltest.R
qtlcharts/tests/testthat.R
qtlcharts/tests/testthat
qtlcharts/tests/testthat/test-chartopts.R
qtlcharts/tests/testthat/test-group.R
qtlcharts/tests/testthat/test-qtleffects.R
qtlcharts/tests/testthat/test-util.R
qtlcharts/NAMESPACE
qtlcharts/data
qtlcharts/data/geneExpr.rda
qtlcharts/data/grav.rda
qtlcharts/R
qtlcharts/R/iboxplot.R qtlcharts/R/convert_pxg.R qtlcharts/R/iplotMap.R qtlcharts/R/convert_scanone.R qtlcharts/R/qtlcharts.R qtlcharts/R/grav-data.R qtlcharts/R/iplot.R qtlcharts/R/idotplot.R qtlcharts/R/geneExpr-data.R qtlcharts/R/scat2scat.R qtlcharts/R/convert4crosstab.R qtlcharts/R/convert4iplotcorr.R qtlcharts/R/estQTLeffects.R qtlcharts/R/iheatmap.R qtlcharts/R/convert4iboxplot.R qtlcharts/R/iplotScantwo.R qtlcharts/R/chartOpts.R qtlcharts/R/itriplot.R qtlcharts/R/convert_map.R qtlcharts/R/util.R qtlcharts/R/iplotPXG.R qtlcharts/R/iplotScanone.R qtlcharts/R/setScreenSize.R qtlcharts/R/iplotCorr.R qtlcharts/R/qtlchartsversion.R qtlcharts/R/iplotCurves.R qtlcharts/R/iplotMScanone.R qtlcharts/R/iplotRF.R
qtlcharts/MD5
qtlcharts/DESCRIPTION
qtlcharts/configure
qtlcharts/man
qtlcharts/man/qtlchartsversion.Rd qtlcharts/man/iplotMap.Rd qtlcharts/man/iplot.Rd qtlcharts/man/itriplot.Rd qtlcharts/man/iplotScantwo.Rd qtlcharts/man/iplotMScanone.Rd qtlcharts/man/geneExpr.Rd qtlcharts/man/iplotPXG.Rd qtlcharts/man/cbindQTLeffects.Rd qtlcharts/man/iplotRF.Rd qtlcharts/man/iboxplot.Rd qtlcharts/man/estQTLeffects.Rd qtlcharts/man/grav.Rd qtlcharts/man/iplotCurves.Rd qtlcharts/man/setScreenSize.Rd qtlcharts/man/idotplot.Rd qtlcharts/man/scat2scat.Rd qtlcharts/man/iplotScanone.Rd qtlcharts/man/iplotCorr.Rd qtlcharts/man/qtlcharts-package.Rd qtlcharts/man/qtlcharts-shiny.Rd qtlcharts/man/iheatmap.Rd
qtlcharts/configure.win
qtlcharts/LICENSE

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