estimate_payoffs: Estimate Payoff Parameters for HIV Phenotype Interactions

In qvirus: Quantum Computing for Analyzing CD4 Lymphocytes and Antiretroviral Therapy

Estimate Payoff Parameters for HIV Phenotype Interactions

Description

This function estimates the payoff parameters for HIV phenotype interactions based on the provided classification object and predictions from a viral load model. It calculates the mean differences in viral loads and CD4 counts, as well as the average payoffs for each classification.

Usage

estimate_payoffs(object, predictions)

Arguments

object	An object of class InteractionClassification containing the data on viral load differences and CD4 counts.
predictions	A data.frame containing predictions of viral loads or CD4 values.

Examples

set.seed(42)
data(cd_3)
cd_data <- cd_3[,-1]
cd_result <- cds_diff(cd_data)
data(vl_3)
vl_data <- vl_3[,-1]
vl_result <- vlogs_diff(vl_data)
result <- InteractionClassification(cd_result = cd_result, vl_result = vl_result)
data(preds)
payoffs_results <- estimate_payoffs(result, preds)

qvirus documentation built on June 8, 2025, 10:06 a.m.