displayTopN: Print the top-n rows for each ChEA3 collection

In rChEA3: R Client for the 'ChEA3' Transcription Factor Enrichment API

Print the top-n rows for each ChEA3 collection

Description

Print the top-n rows for each ChEA3 collection

Usage

displayTopN(
  results,
  n = 10,
  columns = c("Rank", "TF", "Scaled Rank", "Set_name", "Intersect", "Score",
    "FET p-value", "FDR", "Odds Ratio")
)

Arguments

results	A named list of data frames (the output of queryChEA3()).
n	Number of rows to show per table (default: 10).
columns	Optional character vector of column names to display (keeps intersection with what's present in each data frame).

Value

(Invisibly) a named list of data frames, each truncated to the first n rows (and columns if provided).

Examples

    genes <- c("TP53", "MYC", "STAT3", "FOXO1", "BRCA1")
    results <- queryChEA3(genes, verbose = FALSE)

    # Display top 10 TFs from each collection
    displayTopN(results)

    # Display only top 5 with specific columns
    displayTopN(results, n = 5, columns = c("Rank", "TF", "Score", "FDR"))

rChEA3 documentation built on Nov. 5, 2025, 6:49 p.m.