Files in reems
Estimating Effective Migration Surfaces from Single Nucleotide Polymorphism Data
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/eems.resid.heatmap.R
R/plot.utils.R
R/eems.voronoi.samples.R
R/plot.logposterior.R
R/data.R
R/eems.posterior.draws.R
R/contour.funcs.R
R/eems.population.grid.R
R/recenter.longitudes.R
R/contour.with.holes.R
R/plot.inputs.R
R/plot.dissimilarities.R
R/color.funcs.R
R/zzz.R
R/reems-package.R
R/eems.run.R
R/eems.plots.R
R/utils.R
src/habitat.cpp
src/Makevars
src/habitat.h
src/reems.cpp
src/graph.cpp
src/RcppExports.cpp
src/util.h
src/eems.cpp
src/util.cpp
src/runeems_snps.cpp
src/eems.h
src/voronoi2raster.cpp
src/draw.h
src/mcmc.h
src/draw.cpp
src/mcmc.cpp
src/runeems_snps.h
src/graph.h
inst/CITATION
inst/doc/reems.html
inst/doc/reems.Rmd
inst/doc/reems.R
inst/extdata/EEMS-barrier.outer
inst/extdata/barrier-schemeX-nIndiv300-nSites3000.edges
inst/extdata/barrier-schemeX-nIndiv300-nSites3000.outer
inst/extdata/EEMS-example.outer
inst/extdata/EEMS-barrier.diffs
inst/extdata/barrier-schemeX-nIndiv300-nSites3000.diffs
inst/extdata/barrier-schemeX-nIndiv300-nSites3000.coord
inst/extdata/barrier-schemeX-nIndiv300-nSites3000.demes
inst/extdata/barrier-schemeX-nIndiv300-nSites3000.ipmap
inst/extdata/EEMS-example.coord
inst/extdata/EEMS-barrier.coord
inst/extdata/EEMS-example/mcmcwcoord.txt
inst/extdata/EEMS-example/lastqseeds.txt
inst/extdata/EEMS-example/mcmcmtiles.txt
inst/extdata/EEMS-example/mcmcxcoord.txt
inst/extdata/EEMS-example/demes.txt
inst/extdata/EEMS-example/lastqtiles.txt
inst/extdata/EEMS-example/rdistJtDhatJ.txt
inst/extdata/EEMS-example/mcmcmrates.txt
inst/extdata/EEMS-example/mcmcycoord.txt
inst/extdata/EEMS-example/mcmcmhyper.txt
inst/extdata/EEMS-example/lastmtiles.txt
inst/extdata/EEMS-example/mcmczcoord.txt
inst/extdata/EEMS-example/lastqhyper.txt
inst/extdata/EEMS-example/rdistJtDobsJ.txt
inst/extdata/EEMS-example/mcmcqhyper.txt
inst/extdata/EEMS-example/lastmhyper.txt
inst/extdata/EEMS-example/edges.txt
inst/extdata/EEMS-example/mcmcqrates.txt
inst/extdata/EEMS-example/lastthetas.txt
inst/extdata/EEMS-example/lastqeffct.txt
inst/extdata/EEMS-example/lastmseeds.txt
inst/extdata/EEMS-example/lastpilogl.txt
inst/extdata/EEMS-example/lastmeffct.txt
inst/extdata/EEMS-example/mcmcpilogl.txt
inst/extdata/EEMS-example/ipmap.txt
inst/extdata/EEMS-example/rdistoDemes.txt
inst/extdata/EEMS-example/mcmcthetas.txt
inst/extdata/EEMS-example/mcmcqtiles.txt
inst/extdata/EEMS-example/outer.txt
inst/extdata/EEMS-example/eemsrun.txt
inst/extdata/EEMS-barrier/mcmcwcoord.txt
inst/extdata/EEMS-barrier/lastqseeds.txt
inst/extdata/EEMS-barrier/mcmcmtiles.txt
inst/extdata/EEMS-barrier/mcmcxcoord.txt
inst/extdata/EEMS-barrier/demes.txt
inst/extdata/EEMS-barrier/lastqtiles.txt
inst/extdata/EEMS-barrier/lastdfpars.txt
inst/extdata/EEMS-barrier/rdistJtDhatJ.txt
inst/extdata/EEMS-barrier/mcmcmrates.txt
inst/extdata/EEMS-barrier/mcmcycoord.txt
inst/extdata/EEMS-barrier/mcmcmhyper.txt
inst/extdata/EEMS-barrier/lastmtiles.txt
inst/extdata/EEMS-barrier/mcmczcoord.txt
inst/extdata/EEMS-barrier/lastqhyper.txt
inst/extdata/EEMS-barrier/rdistJtDobsJ.txt
inst/extdata/EEMS-barrier/mcmcqhyper.txt
inst/extdata/EEMS-barrier/lastmhyper.txt
inst/extdata/EEMS-barrier/edges.txt
inst/extdata/EEMS-barrier/mcmcqrates.txt
inst/extdata/EEMS-barrier/lastthetas.txt
inst/extdata/EEMS-barrier/lastqeffct.txt
inst/extdata/EEMS-barrier/lastmseeds.txt
inst/extdata/EEMS-barrier/lastpilogl.txt
inst/extdata/EEMS-barrier/lastmeffct.txt
inst/extdata/EEMS-barrier/mcmcpilogl.txt
inst/extdata/EEMS-barrier/ipmap.txt
inst/extdata/EEMS-barrier/rdistoDemes.txt
inst/extdata/EEMS-barrier/mcmcthetas.txt
inst/extdata/EEMS-barrier/mcmcqtiles.txt
inst/extdata/EEMS-barrier/outer.txt
inst/extdata/EEMS-barrier/eemsrun.txt
inst/extdata/exChain1/mcmcwcoord.txt
inst/extdata/exChain1/lastqseeds.txt
inst/extdata/exChain1/mcmcmtiles.txt
inst/extdata/exChain1/mcmcxcoord.txt
inst/extdata/exChain1/demes.txt
inst/extdata/exChain1/lastqtiles.txt
inst/extdata/exChain1/lastdfpars.txt
inst/extdata/exChain1/rdistJtDhatJ.txt
inst/extdata/exChain1/mcmcmrates.txt
inst/extdata/exChain1/mcmcycoord.txt
inst/extdata/exChain1/mcmcmhyper.txt
inst/extdata/exChain1/lastmtiles.txt
inst/extdata/exChain1/mcmczcoord.txt
inst/extdata/exChain1/lastqhyper.txt
inst/extdata/exChain1/rdistJtDobsJ.txt
inst/extdata/exChain1/mcmcqhyper.txt
inst/extdata/exChain1/lastmhyper.txt
inst/extdata/exChain1/edges.txt
inst/extdata/exChain1/mcmcqrates.txt
inst/extdata/exChain1/lastthetas.txt
inst/extdata/exChain1/lastqeffct.txt
inst/extdata/exChain1/lastmseeds.txt
inst/extdata/exChain1/lastpilogl.txt
inst/extdata/exChain1/lastmeffct.txt
inst/extdata/exChain1/mcmcpilogl.txt
inst/extdata/exChain1/ipmap.txt
inst/extdata/exChain1/rdistoDemes.txt
inst/extdata/exChain1/mcmcthetas.txt
inst/extdata/exChain1/mcmcqtiles.txt
inst/extdata/exChain1/outer.txt
inst/extdata/exChain1/eemsrun.txt
inst/extdata/EEMS-popgrid/demes.txt
inst/extdata/EEMS-popgrid/edges.txt
inst/extdata/EEMS-popgrid/ipmap.txt
inst/extdata/EEMS-popgrid/outer.txt
inst/extdata/EEMS-popgrid/eemsrun.txt
build/vignette.rds
tests/testthat.R
tests/testthat/test-eems.voronoi.samples.R
tests/testthat/test-outer.buffered.R
tests/testthat/test-grid.make.R
tests/testthat/test-eems.from.files.R
tests/testthat/test-eems.plots.R
tests/testthat/test-eems.posterior.draws.R
tests/testthat/test-eems.R
tests/testthat/test-eems.population.grid.R
vignettes/reems.Rmd
data/ex.coords.rda
data/ex.freqs.rda
man/outer.buffered.Rd
man/eems.posterior.draws.Rd
man/eems.from.files.Rd
man/eems.plots.Rd
man/ex.freqs.Rd
man/grid.make.Rd
man/reems-package.Rd
man/eems.Rd
man/eems.population.grid.Rd
man/ex.coords.Rd
man/eems.voronoi.samples.Rd
