reproducer: Reproduce Statistical Analyses and Meta-Analyses

Includes data analysis functions (e.g., to calculate effect sizes and 95% Confidence Intervals (CI) on Standardised Effect Sizes (d) for ABBA cross-over repeated-measures experimental designs), data presentation functions (e.g., density curve overlaid on histogram), and the data sets analyzed in different research papers in software engineering (e.g., related to software defect prediction or multi-site experiment concerning the extent to which structured abstracts were clearer and more complete than conventional abstracts) to streamline reproducible research in software engineering.

AuthorLech Madeyski [cre, aut, ctb], Marian Jureczko [ctb] (Data contributor), Barbara Kitchenham [ctb] (Data and code contributor), David Budgen [ctb] (Data contributor), Pearl Brereton [ctb] (Data contributor), Jacky Keung [ctb] (Data contributor), Stuart Charters [ctb] (Data contributor), Shirley Gibbs [ctb] (Data contributor), Amnart Pohthong [ctb] (Data contributor)
Date of publication2017-02-12 20:50:16
MaintainerLech Madeyski <lech.madeyski@gmail.com>
LicenseCC BY 4.0
Version0.1.8
http://madeyski.e-informatyka.pl/reproducible-research/

View on CRAN

Man pages

boxplotAndDensityCurveOnHistogram: boxplotAndDensityCurveOnHistogram

boxplotHV: boxplotHV

Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR: Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR data form a set of...

densityCurveOnHistogram: densityCurveOnHistogram

effectSizeCI: effectSizeCI

fmt: fmt

getEffectSizesABBA: getEffectSizesABBA

getEffectSizesABBAIgnoringPeriodEffect: getEffectSizesABBAIgnoringPeriodEffect

getSimulationData: getSimulationData

getTheoreticalEffectSizeVariancesABBA: getTheoreticalEffectSizeVariancesABBA

KitchenhamMadeyskiBudgen16.COCOMO: KitchenhamMadeyskiBudgen16.COCOMO data

KitchenhamMadeyskiBudgen16.DiffInDiffData: KitchenhamMadeyskiBudgen16.DiffInDiffData data

KitchenhamMadeyskiBudgen16.FINNISH: KitchenhamMadeyskiBudgen16.FINNISH data

KitchenhamMadeyskiBudgen16.PolishData: KitchenhamMadeyskiBudgen16.PolishData data

KitchenhamMadeyskiBudgen16.PolishSubjects: KitchenhamMadeyskiBudgen16.PolishSubjects data

KitchenhamMadeyskiBudgen16.SubjectData: KitchenhamMadeyskiBudgen16.SubjectData

KitchenhamMadeyski.SimulatedCrossoverDataSets: KitchenhamMadeyski.SimulatedCrossoverDataSets data

Madeyski15EISEJ.OpenProjects: Madeyski15EISEJ.OpenProjects data

Madeyski15EISEJ.PropProjects: Madeyski15EISEJ.PropProjects data

Madeyski15EISEJ.StudProjects: Madeyski15EISEJ.StudProjects data

Madeyski15SQJ.NDC: Madeyski15SQJ.NDC data

MadeyskiKitchenham.EUBASdata: MadeyskiKitchenham.EUBASdata data

MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR: MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR data form a set...

percentageInaccuracyOfLargeSampleVarianceApproximation: percentageInaccuracyOfLargeSampleVarianceApproximation

plotOutcomesForIndividualsInEachSequenceGroup: plotOutcomesForIndividualsInEachSequenceGroup

printXTable: printXTable

proportionOfSignificantTValuesUsingCorrectAnalysis: proportionOfSignificantTValuesUsingCorrectAnalysis

proportionOfSignificantTValuesUsingIncorrectAnalysis: proportionOfSignificantTValuesUsingIncorrectAnalysis

readExcelSheet: readExcelSheet

reproduceForestPlotRandomEffects: reproduceForestPlotRandomEffects()

reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimentalDesignModerator: reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimentalDesignModerator()

reproduceMixedEffectsAnalysisWithExperimentalDesignModerator: reproduceMixedEffectsAnalysisWithExperimentalDesignModerator()

reproduceMixedEffectsForestPlotWithExperimentalDesignModerator: reproduceMixedEffectsForestPlotWithExperimentalDesignModerator()

reproduceSimulationResultsBasedOn500Reps1000Obs: reproduceSimulationResultsBasedOn500Reps1000Obs

reproduceTableWithEffectSizesBasedOnMeanDifferences: reproduceTableWithEffectSizesBasedOnMeanDifferences()

reproduceTableWithPossibleModeratingFactors: reproduceTableWithPossibleModeratingFactors()

reproduceTableWithSourceDataByCiolkowski: reproduceTableWithSourceDataByCiolkowski

Functions

boxplotAndDensityCurveOnHistogram Man page
boxplotHV Man page
Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR Man page
densityCurveOnHistogram Man page
effectSizeCI Man page
fmt Man page
getEffectSizesABBA Man page
getEffectSizesABBAIgnoringPeriodEffect Man page
getSimulationData Man page
getTheoreticalEffectSizeVariancesABBA Man page
KitchenhamMadeyskiBudgen16.COCOMO Man page
KitchenhamMadeyskiBudgen16.DiffInDiffData Man page
KitchenhamMadeyskiBudgen16.FINNISH Man page
KitchenhamMadeyskiBudgen16.PolishData Man page
KitchenhamMadeyskiBudgen16.PolishSubjects Man page
KitchenhamMadeyskiBudgen16.SubjectData Man page
KitchenhamMadeyski.SimulatedCrossoverDataSets Man page
Madeyski15EISEJ.OpenProjects Man page
Madeyski15EISEJ.PropProjects Man page
Madeyski15EISEJ.StudProjects Man page
Madeyski15SQJ.NDC Man page
MadeyskiKitchenham.EUBASdata Man page
MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR Man page
percentageInaccuracyOfLargeSampleVarianceApproximation Man page
plotOutcomesForIndividualsInEachSequenceGroup Man page
printXTable Man page
proportionOfSignificantTValuesUsingCorrectAnalysis Man page
proportionOfSignificantTValuesUsingIncorrectAnalysis Man page
readExcelSheet Man page
reproduceForestPlotRandomEffects Man page
reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimenta Man page
reproduceMixedEffectsAnalysisWithExperimentalDesignModerator Man page
reproduceMixedEffectsForestPlotWithExperimentalDesignModerator Man page
reproduceSimulationResultsBasedOn500Reps1000Obs Man page
reproduceTableWithEffectSizesBasedOnMeanDifferences Man page
reproduceTableWithPossibleModeratingFactors Man page
reproduceTableWithSourceDataByCiolkowski Man page

Files

reproducer
reproducer/inst
reproducer/inst/CITATION
reproducer/inst/extdata
reproducer/inst/extdata/DataSet.xlsx
reproducer/NAMESPACE
reproducer/NEWS.md
reproducer/data
reproducer/data/Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR.rda
reproducer/data/MadeyskiKitchenham.EUBASdata.rda
reproducer/data/KitchenhamMadeyskiBudgen16.SubjectData.rda
reproducer/data/KitchenhamMadeyskiBudgen16.COCOMO.rda
reproducer/data/Madeyski15SQJ.NDC.rda
reproducer/data/KitchenhamMadeyskiBudgen16.PolishSubjects.rda
reproducer/data/Madeyski15EISEJ.PropProjects.rda
reproducer/data/KitchenhamMadeyskiBudgen16.FINNISH.rda
reproducer/data/KitchenhamMadeyskiBudgen16.PolishData.rda
reproducer/data/KitchenhamMadeyski.SimulatedCrossoverDataSets.rda
reproducer/data/MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR.rda
reproducer/data/Madeyski15EISEJ.StudProjects.rda
reproducer/data/KitchenhamMadeyskiBudgen16.DiffInDiffData.rda
reproducer/data/Madeyski15EISEJ.OpenProjects.rda
reproducer/R
reproducer/R/reproducer.R reproducer/R/data.R reproducer/R/MadeyskiKitchenhamMetaAnalysis.R
reproducer/README.md
reproducer/MD5
reproducer/DESCRIPTION
reproducer/man
reproducer/man/proportionOfSignificantTValuesUsingIncorrectAnalysis.Rd reproducer/man/reproduceMixedEffectsForestPlotWithExperimentalDesignModerator.Rd reproducer/man/Madeyski15EISEJ.PropProjects.Rd reproducer/man/boxplotAndDensityCurveOnHistogram.Rd reproducer/man/getTheoreticalEffectSizeVariancesABBA.Rd reproducer/man/reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimentalDesignModerator.Rd reproducer/man/Madeyski15EISEJ.StudProjects.Rd reproducer/man/reproduceForestPlotRandomEffects.Rd reproducer/man/reproduceTableWithSourceDataByCiolkowski.Rd reproducer/man/KitchenhamMadeyskiBudgen16.DiffInDiffData.Rd reproducer/man/readExcelSheet.Rd reproducer/man/getSimulationData.Rd reproducer/man/getEffectSizesABBA.Rd reproducer/man/reproduceMixedEffectsAnalysisWithExperimentalDesignModerator.Rd reproducer/man/fmt.Rd reproducer/man/KitchenhamMadeyskiBudgen16.COCOMO.Rd reproducer/man/KitchenhamMadeyski.SimulatedCrossoverDataSets.Rd reproducer/man/plotOutcomesForIndividualsInEachSequenceGroup.Rd reproducer/man/MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR.Rd reproducer/man/reproduceTableWithEffectSizesBasedOnMeanDifferences.Rd reproducer/man/KitchenhamMadeyskiBudgen16.SubjectData.Rd reproducer/man/boxplotHV.Rd reproducer/man/densityCurveOnHistogram.Rd reproducer/man/Madeyski15SQJ.NDC.Rd reproducer/man/getEffectSizesABBAIgnoringPeriodEffect.Rd reproducer/man/MadeyskiKitchenham.EUBASdata.Rd reproducer/man/KitchenhamMadeyskiBudgen16.PolishSubjects.Rd reproducer/man/KitchenhamMadeyskiBudgen16.FINNISH.Rd reproducer/man/Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR.Rd reproducer/man/printXTable.Rd reproducer/man/percentageInaccuracyOfLargeSampleVarianceApproximation.Rd reproducer/man/effectSizeCI.Rd reproducer/man/proportionOfSignificantTValuesUsingCorrectAnalysis.Rd reproducer/man/reproduceSimulationResultsBasedOn500Reps1000Obs.Rd reproducer/man/Madeyski15EISEJ.OpenProjects.Rd reproducer/man/reproduceTableWithPossibleModeratingFactors.Rd reproducer/man/KitchenhamMadeyskiBudgen16.PolishData.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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