reproducer: Reproduce Statistical Analyses and Meta-Analyses
Version 0.1.8

Includes data analysis functions (e.g., to calculate effect sizes and 95% Confidence Intervals (CI) on Standardised Effect Sizes (d) for ABBA cross-over repeated-measures experimental designs), data presentation functions (e.g., density curve overlaid on histogram), and the data sets analyzed in different research papers in software engineering (e.g., related to software defect prediction or multi-site experiment concerning the extent to which structured abstracts were clearer and more complete than conventional abstracts) to streamline reproducible research in software engineering.

AuthorLech Madeyski [cre, aut, ctb], Marian Jureczko [ctb] (Data contributor), Barbara Kitchenham [ctb] (Data and code contributor), David Budgen [ctb] (Data contributor), Pearl Brereton [ctb] (Data contributor), Jacky Keung [ctb] (Data contributor), Stuart Charters [ctb] (Data contributor), Shirley Gibbs [ctb] (Data contributor), Amnart Pohthong [ctb] (Data contributor)
Date of publication2017-02-12 20:50:16
MaintainerLech Madeyski <lech.madeyski@gmail.com>
LicenseCC BY 4.0
Version0.1.8
URL http://madeyski.e-informatyka.pl/reproducible-research/
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("reproducer")

Getting started

README.md

Popular man pages

densityCurveOnHistogram: densityCurveOnHistogram
fmt: fmt
Madeyski15EISEJ.StudProjects: Madeyski15EISEJ.StudProjects data
reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimentalDesignModerator: reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimentalDesignModerator()
reproduceMixedEffectsForestPlotWithExperimentalDesignModerator: reproduceMixedEffectsForestPlotWithExperimentalDesignModerator()
reproduceTableWithEffectSizesBasedOnMeanDifferences: reproduceTableWithEffectSizesBasedOnMeanDifferences()
reproduceTableWithSourceDataByCiolkowski: reproduceTableWithSourceDataByCiolkowski
See all...

All man pages Function index File listing

Man pages

boxplotAndDensityCurveOnHistogram: boxplotAndDensityCurveOnHistogram
boxplotHV: boxplotHV
Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR: Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR data form a set of...
densityCurveOnHistogram: densityCurveOnHistogram
effectSizeCI: effectSizeCI
fmt: fmt
getEffectSizesABBA: getEffectSizesABBA
getEffectSizesABBAIgnoringPeriodEffect: getEffectSizesABBAIgnoringPeriodEffect
getSimulationData: getSimulationData
getTheoreticalEffectSizeVariancesABBA: getTheoreticalEffectSizeVariancesABBA
KitchenhamMadeyskiBudgen16.COCOMO: KitchenhamMadeyskiBudgen16.COCOMO data
KitchenhamMadeyskiBudgen16.DiffInDiffData: KitchenhamMadeyskiBudgen16.DiffInDiffData data
KitchenhamMadeyskiBudgen16.FINNISH: KitchenhamMadeyskiBudgen16.FINNISH data
KitchenhamMadeyskiBudgen16.PolishData: KitchenhamMadeyskiBudgen16.PolishData data
KitchenhamMadeyskiBudgen16.PolishSubjects: KitchenhamMadeyskiBudgen16.PolishSubjects data
KitchenhamMadeyskiBudgen16.SubjectData: KitchenhamMadeyskiBudgen16.SubjectData
KitchenhamMadeyski.SimulatedCrossoverDataSets: KitchenhamMadeyski.SimulatedCrossoverDataSets data
Madeyski15EISEJ.OpenProjects: Madeyski15EISEJ.OpenProjects data
Madeyski15EISEJ.PropProjects: Madeyski15EISEJ.PropProjects data
Madeyski15EISEJ.StudProjects: Madeyski15EISEJ.StudProjects data
Madeyski15SQJ.NDC: Madeyski15SQJ.NDC data
MadeyskiKitchenham.EUBASdata: MadeyskiKitchenham.EUBASdata data
MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR: MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR data form a set...
percentageInaccuracyOfLargeSampleVarianceApproximation: percentageInaccuracyOfLargeSampleVarianceApproximation
plotOutcomesForIndividualsInEachSequenceGroup: plotOutcomesForIndividualsInEachSequenceGroup
printXTable: printXTable
proportionOfSignificantTValuesUsingCorrectAnalysis: proportionOfSignificantTValuesUsingCorrectAnalysis
proportionOfSignificantTValuesUsingIncorrectAnalysis: proportionOfSignificantTValuesUsingIncorrectAnalysis
readExcelSheet: readExcelSheet
reproduceForestPlotRandomEffects: reproduceForestPlotRandomEffects()
reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimentalDesignModerator: reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimentalDesignModerator()
reproduceMixedEffectsAnalysisWithExperimentalDesignModerator: reproduceMixedEffectsAnalysisWithExperimentalDesignModerator()
reproduceMixedEffectsForestPlotWithExperimentalDesignModerator: reproduceMixedEffectsForestPlotWithExperimentalDesignModerator()
reproduceSimulationResultsBasedOn500Reps1000Obs: reproduceSimulationResultsBasedOn500Reps1000Obs
reproduceTableWithEffectSizesBasedOnMeanDifferences: reproduceTableWithEffectSizesBasedOnMeanDifferences()
reproduceTableWithPossibleModeratingFactors: reproduceTableWithPossibleModeratingFactors()
reproduceTableWithSourceDataByCiolkowski: reproduceTableWithSourceDataByCiolkowski

Functions

Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR Man page
KitchenhamMadeyski.SimulatedCrossoverDataSets Man page
KitchenhamMadeyskiBudgen16.COCOMO Man page
KitchenhamMadeyskiBudgen16.DiffInDiffData Man page
KitchenhamMadeyskiBudgen16.FINNISH Man page
KitchenhamMadeyskiBudgen16.PolishData Man page
KitchenhamMadeyskiBudgen16.PolishSubjects Man page
KitchenhamMadeyskiBudgen16.SubjectData Man page
Madeyski15EISEJ.OpenProjects Man page
Madeyski15EISEJ.PropProjects Man page
Madeyski15EISEJ.StudProjects Man page
Madeyski15SQJ.NDC Man page
MadeyskiKitchenham.EUBASdata Man page
MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR Man page
boxplotAndDensityCurveOnHistogram Man page Source code
boxplotHV Man page Source code
densityCurveOnHistogram Man page Source code
effectSizeCI Man page Source code
fmt Man page Source code
getEffectSizesABBA Man page Source code
getEffectSizesABBAIgnoringPeriodEffect Man page Source code
getSimulationData Man page Source code
getTheoreticalEffectSizeVariancesABBA Man page Source code
percentageInaccuracyOfLargeSampleVarianceApproximation Man page Source code
plotOutcomesForIndividualsInEachSequenceGroup Man page Source code
printXTable Man page Source code
proportionOfSignificantTValuesUsingCorrectAnalysis Man page Source code
proportionOfSignificantTValuesUsingIncorrectAnalysis Man page Source code
readExcelSheet Man page Source code
reproduceForestPlotRandomEffects Man page Source code
reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimenta Man page Source code
reproduceMixedEffectsAnalysisWithExperimentalDesignModerator Man page Source code
reproduceMixedEffectsForestPlotWithExperimentalDesignModerator Man page Source code
reproduceSimulationResultsBasedOn500Reps1000Obs Man page Source code
reproduceTableWithEffectSizesBasedOnMeanDifferences Man page Source code
reproduceTableWithPossibleModeratingFactors Man page Source code
reproduceTableWithSourceDataByCiolkowski Man page Source code

Files

inst
inst/CITATION
inst/extdata
inst/extdata/DataSet.xlsx
NAMESPACE
NEWS.md
data
data/Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR.rda
data/MadeyskiKitchenham.EUBASdata.rda
data/KitchenhamMadeyskiBudgen16.SubjectData.rda
data/KitchenhamMadeyskiBudgen16.COCOMO.rda
data/Madeyski15SQJ.NDC.rda
data/KitchenhamMadeyskiBudgen16.PolishSubjects.rda
data/Madeyski15EISEJ.PropProjects.rda
data/KitchenhamMadeyskiBudgen16.FINNISH.rda
data/KitchenhamMadeyskiBudgen16.PolishData.rda
data/KitchenhamMadeyski.SimulatedCrossoverDataSets.rda
data/MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR.rda
data/Madeyski15EISEJ.StudProjects.rda
data/KitchenhamMadeyskiBudgen16.DiffInDiffData.rda
data/Madeyski15EISEJ.OpenProjects.rda
R
R/reproducer.R
R/data.R
R/MadeyskiKitchenhamMetaAnalysis.R
README.md
MD5
DESCRIPTION
man
man/proportionOfSignificantTValuesUsingIncorrectAnalysis.Rd
man/reproduceMixedEffectsForestPlotWithExperimentalDesignModerator.Rd
man/Madeyski15EISEJ.PropProjects.Rd
man/boxplotAndDensityCurveOnHistogram.Rd
man/getTheoreticalEffectSizeVariancesABBA.Rd
man/reproduceMixedEffectsAnalysisWithEstimatedVarianceAndExperimentalDesignModerator.Rd
man/Madeyski15EISEJ.StudProjects.Rd
man/reproduceForestPlotRandomEffects.Rd
man/reproduceTableWithSourceDataByCiolkowski.Rd
man/KitchenhamMadeyskiBudgen16.DiffInDiffData.Rd
man/readExcelSheet.Rd
man/getSimulationData.Rd
man/getEffectSizesABBA.Rd
man/reproduceMixedEffectsAnalysisWithExperimentalDesignModerator.Rd
man/fmt.Rd
man/KitchenhamMadeyskiBudgen16.COCOMO.Rd
man/KitchenhamMadeyski.SimulatedCrossoverDataSets.Rd
man/plotOutcomesForIndividualsInEachSequenceGroup.Rd
man/MadeyskiKitchenham.MetaAnalysis.PBRvsCBRorAR.Rd
man/reproduceTableWithEffectSizesBasedOnMeanDifferences.Rd
man/KitchenhamMadeyskiBudgen16.SubjectData.Rd
man/boxplotHV.Rd
man/densityCurveOnHistogram.Rd
man/Madeyski15SQJ.NDC.Rd
man/getEffectSizesABBAIgnoringPeriodEffect.Rd
man/MadeyskiKitchenham.EUBASdata.Rd
man/KitchenhamMadeyskiBudgen16.PolishSubjects.Rd
man/KitchenhamMadeyskiBudgen16.FINNISH.Rd
man/Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR.Rd
man/printXTable.Rd
man/percentageInaccuracyOfLargeSampleVarianceApproximation.Rd
man/effectSizeCI.Rd
man/proportionOfSignificantTValuesUsingCorrectAnalysis.Rd
man/reproduceSimulationResultsBasedOn500Reps1000Obs.Rd
man/Madeyski15EISEJ.OpenProjects.Rd
man/reproduceTableWithPossibleModeratingFactors.Rd
man/KitchenhamMadeyskiBudgen16.PolishData.Rd
reproducer documentation built on May 19, 2017, 9:58 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

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