permu_edge: get lists of permuted weighted within-sample edge-counts and...

In rgTest: Robust Graph-Based Two-Sample Test

get lists of permuted weighted within-sample edge-counts and between-sample edge-counts

Description

get lists of permuted weighted within-sample edge-counts and between-sample edge-counts

Usage

permu_edge(n_per, E, n1, n2, wei, progress_bar = FALSE)

Arguments

n_per	number of permutations.
E	an edge matrix representing a similarity graph. Each row represents an edge and records the indices of two ends of an edge in two columns. The indices of observations in sample 1 are from 1 to n1 and indices of observations in sample 2 are from 1+n1 to n1+n2.
n1	number of observations in sample 1.
n2	number of observations in sample 2.
wei	a vector of weights of each edge.
progress_bar	a logical evaluating to TRUE or FALSE indicating whether a progress bar of the permutation should be printed.

Value

R1	the permuted weighted within-sample edge-counts for sample 1.
R2	the permuted weighted within-sample edge-counts for sample 2.
R	the permuted weighted between-sample edge-counts.

rgTest documentation built on Aug. 14, 2023, 5:08 p.m.