Files in ribiosIO
Input/Output Utilities of the 'ribios' Suite
MD5
NEWS
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/writeMatrix.tableList.R
R/read_david.R
R/read_chip.R
R/read_bed.R
R/write_gmt.R
R/ribiosIO.R
R/read_biokit_exprs.R
R/write_gct.R
R/write.tableList.R
R/read_fasta.R
R/checkfile.R
R/GctMatrix.R
R/isGctFile.R
R/read_gmt.R
R/writeMatrix.R
R/iofile.R
R/read_cls.R
R/ampliseq.R
R/read_trimmed_lines.R
R/read_illumina_sampleSheet.R
R/loadFile.R
R/read_gct.R
R/read_exprs_matrix.R
R/writeStrList.R
R/read_pheno.R
src/read_gmt.c
src/Makevars
src/linestream.c
src/hlrmisc.c
src/read_chip.c
src/array.c
src/log.c
src/init.c
src/read_biokit_exprs.c
src/plabla.c
src/format.c
src/read_gct.c
src/write_gmt.c
inst/include/ribios_io.h
inst/include/bios_headers/format.h
inst/include/bios_headers/array.h
inst/include/bios_headers/plabla.h
inst/include/bios_headers/plabla_conf.h
inst/include/bios_headers/hlrmisc.h
inst/include/bios_headers/linestream.h
inst/include/bios_headers/log.h
inst/extdata/test_colnames.gct
inst/extdata/test_read_exprs_matrix_full.tsv
inst/extdata/testSampleInfo.txt
inst/extdata/test_read_exprs_matrix_desc.tsv
inst/extdata/test_read_exprs_matrix_full_duprownames.tsv
inst/extdata/test_nonnumbers.txt
inst/extdata/test.gct
inst/extdata/test.cls
inst/extdata/test_lessStrict.gct
inst/extdata/test_read_exprs_matrix.gct
inst/extdata/test_nonnumbers.gct
inst/extdata/test_read_exprs_matrix_duprownames.txt
inst/extdata/test_read_exprs_matrix.txt
inst/extdata/test_read_exprs_matrix.tsv
inst/extdata/test.chip
inst/extdata/test_read_exprs_matrix_full_duprownames.txt
inst/extdata/test_colnames.txt
inst/extdata/test_read_exprs_matrix_duprownames.tsv
inst/extdata/test_read_exprs_matrix_full.txt
inst/extdata/example-DAVID-output-subset.txt
inst/extdata/testSampleInfo-cov.txt
inst/extdata/test.gmt
inst/extdata/subsetGctByGmt_data/test-genesymbol.gct
inst/extdata/subsetGctByGmt_data/test.gct
inst/extdata/subsetGctByGmt_data/test.gmt
inst/extdata/ampliseq-data/coverageAnalysis_out/IonXpress_001/001.amplicon.cov.xls
inst/extdata/ampliseq-data/coverageAnalysis_out/IonXpress_002/002.amplicon.cov.xls
inst/extdata/ampliseq-data/coverageAnalysis_out/IonXpress_003/003.amplicon.cov.xls
inst/extdata/biokit_expression_files/biokit-output-2.expression
inst/extdata/biokit_expression_files/biokit-output-4.expression
inst/extdata/biokit_expression_files/biokit-output-1.expression
inst/extdata/biokit_expression_files/biokit-output-3.expression
inst/Rscript/test-subsetGctByGmt.bash
inst/Rscript/subsetGctByGmt.Rscript
tests/testthat.R
tests/testthat/test_read_gmt.R
tests/testthat/test_writeMatrix.tableList.R
tests/testthat/test_write_annotated_ampliseq_amplicons.R
tests/testthat/test_read_exprs_matrix.R
tests/testthat/test_read_biokit_exprs.R
tests/testthat/test_loadObject.R
tests/testthat/test_fasta.R
man/read_trimmed_lines.Rd
man/read_fasta.Rd
man/as_numeric_matrix.Rd
man/setDataDir.Rd
man/gctDesc.Rd
man/read_raw_ampliseq_amplicons.Rd
man/iofile.Rd
man/isGctFile.Rd
man/loadObjectInEnv.Rd
man/optional_suppress_warning.Rd
man/read_biokit_exprs.Rd
man/writeMatrix.Rd
man/read_ampliseq_bedcovgct.Rd
man/cbindGct.Rd
man/sub-.GctMatrix.Rd
man/loadFile.Rd
man/loadObject.Rd
man/gctMatrix2longdf.Rd
man/read_illumina_sampleSheet.Rd
man/read_exprs_matrix.Rd
man/read_bed.Rd
man/strList2DataFrame.Rd
man/write_gct.Rd
man/read_gct_matrix.Rd
man/longdf2gctMatrix.Rd
man/writeMatrix.tableList.Rd
man/find_ampliseq.Rd
man/write_factor.Rd
man/GctMatrix.Rd
man/is_factor_file.Rd
man/write.tableList.Rd
man/loadRDS.Rd
man/read_chip.Rd
man/read_pheno.Rd
man/writeStrList.Rd
man/ribiosIO-package.Rd
man/print.GctMatrix.Rd
man/read_gmt_list.Rd
man/write_annotated_ampliseq_amplicons.Rd
man/read_gmt_dataframe.Rd
man/as.matrix.GctMatrix.Rd
man/read_david.Rd
man/readMatrix.Rd
man/read_annotated_ampliseq_amplicons.Rd
man/read_factor.Rd
man/readTable.Rd
man/write_gmt.Rd
man/getDataDir.Rd
