NEWS.md

In rio: A Swiss-Army Knife for Data I/O

rio 1.1.1

Bus fixes

• Fix #425 for archive formats, the file extension of the input file is determined by the compressed file (like prior rio 1.1.0)

rio 1.1.0

• CRAN release

rio 1.0.3

• Add trust parameter to functions that are used to load various R environment formats (.R, .Rds, .Rdata, etc). This parameter is defaulted to TRUE today to ensure backwards compatibility. A deprecation notice warns this will default to FALSE in rio 2.0. We are informing users that these data types should only be loaded from trusted sources, which should be affirmatively attested to.
• Test and fix the compression mechanism: Gzip, Bzip2 are now working as expected.

Bug fixes

• Fix #412, prevent double usage of which for archive formats
• Fix #415, both import_list() and export_list() support tar archives.
• Fix #421, tar export is only supported by R >= 4.0.3.

rio 1.0.2

• For missing files in import_list it gives more informative warnings fix #389
• Single-item list of data frames can be exported fix #385
• Move stringi to Suggests to reduce compilation time. Add an attribution to the internal data to list out all required packages #378
• Move readr to Imports for fwf. readr is a dependency of haven so it does not increase the number of dependencies. Remove the original read.fwf2 which doesn't guess widths. Keep the widths and col.names to maintain compatibility. #381
• Add (back) a pkgdown website: https://gesistsa.github.io/rio/
• Update all test cases #380

rio 1.0.1

• POTENTIALLY BREAKING: Due to compiling time concerns, roll back the decision to move arrow to Imports. It is now Suggests. setclass = "arrow" works if arrow is installed. #315 #376

rio 1.0.0

• Stop loading the entire namespace of a suggested package when it is available #296
• Unexport objects: .import, .export, is_file_text; remove documentation for arg_reconcile #321
• Update Examples to make them more realistic #327
• Add support for qs #275 h/t David Schoch
• Use arrow to import / export feather #340
• export_list can write multiple data frames to a single archive file (e.g. zip, tar) or a directory #346 h/t David Schoch
• get_info is added #350
• POTENTIALLY BREAKING: setclass parameter is now authoritative. Therefore: import("starwars.csv", data.table = TRUE, setclass = "tibble") will return a tibble (unlike previous versions where a data.table is returned). The default class is data frame. You can either explicitly use the setclass parameter; or set the option: options(rio.import.class = "data.table"). h/t David Schoch #336
• Parquet and feather are now formats supported out of the box; Possible to setclass to arrow / arrow_table; ArrowTabular class can be exported #315
• Add "extension", "labelled" vignettes
• Support readODS 2.1.0 features such as reading and writing Flat ODS; export Multiple data frames #358
• POTENTIALLY BREAKING: Use writexl instead of openxlsx. Option to read xlsx with openxlsx (i.e. import("starwars.xlsx", readxl = FALSE)) is always TRUE. The ability to overwrite an existing sheet in an existing xlsx file is also removed. It is against the design principle of rio.
• POTENTIALLY BREAKING: The following options are deprecated: import(fread), import(readr = TRUE), import(haven), import(readxl) and export(fwrite). import will almost use data.table, haven, readxl, and internal function (for fwf) to import and export data. Currently, those options stay for backward compatibility but will be removed in v2.0.0. #343 h/t David Schoch
• POTENTIALLY BREAKING: ... is handled differently. Underlying functions using "Tidy" convention (e.g. readxl::read_xlsx()) can use "Base Convention" (See the new vignette: remap). Unused arguments passed to the underlying function as ... are silently ignored by default. A new option rio.ignoreunusedargs is added to control this behavior. #326
• Bug fixes
• ... is correctly passed for exporting ODS and feather #318
• POTENTIALLY BREAKING: JSON are exported in UTF-8 by default; solved encoding issues on Windows R < 4.2. This won't affect any modern R installation where UTF-8 is the default. #318
• POTENTIALLY BREAKING: YAML are exported using yaml::write_yaml(). But it can't pass the UTF-8 check on older systems. Disclaimer added. #318
• More check for the file argument #301
• import_list works with single Excel/HTML/Zip online #294
• Correct XML/HTML escaping #303
• Create directory if it doesn't exist #347
• Declutter
• remove the obsolete data.table option #323
• write all documentation blocks in markdown #311
• remove all @importFrom #325 h/t David Schoch
• rearrange "Package Philosophy" as a Vignette #320
• Create a single source of truth about all import and export functions #313
• Clarify all concepts: now there is only format #351
• New authors
• David Schoch @schochastics

rio 0.5.30

• Maintenance release: new maintainer
• Mark .sas7bdat as deprecated
• Change the minimum R version to 3.6

rio 0.5.29

• fixes for CRAN

rio 0.5.28

• Various fixes to tests, examples, and documentation for CRAN.
• Temporarily disabled some tests that failed on Mac M1s.

rio 0.5.27

• Documentation fixes for CRAN.

rio 0.5.26

• Added support for "zsav" format. (#273)

rio 0.5.25

• Modified tests per email request from CRAN.
• Added coerce_character argument (default FALSE) to factorize() to enable coercing character columns to factor. (#278)

rio 0.5.24

• Fix handling of "label" and "labels" attributes when exporting using haven methods (SPSS, Stata, SAS). (#268, h/t Ruben Arslan)
• Fix (a different bug?) handling factors by haven::labelled() (#271, Alex Bokov)
• HTML import can now handle multiple tbody elements within a single table, a th element in a non-header row, and empty elements in either the header or data. (#260, #263, #264 Bill Denney)

rio 0.5.23

• CSVY support is now provided by data.table::fread() and data.table::fwrite(), providing significant performance gains.
• Added an internal arg_reconcile() function to streamline the task of removing/renaming arguments for compatibility with various functions (#245, Alex Bokov)

rio 0.5.22

• Added an export_list() function to write a list of data frames to multiple files using a vector of file names or a file pattern. (#207, h/t Bill Denney)
• Added an is_file_text() function to determine whether a file is in a plain-text format. Optionally narrower subsets of characters can be specified, e.g. ASCII. (#236 Alex Bokov)

rio 0.5.21

• Added support for Apache Arrow (Parquet) files. (#214)
• Fix dropping of variable label in characterize() and factorize(). (#204, h/t David Armstrong)
• import_list() now returns a filename attribute for each data frame in the list (when importing from multiple files), in order to distinguish files with the same base name but different extensions (e.g., import_list(c("foo.csv", "foo.tsv"))). (#208, h/t Vimal Rawat)
• Import of DBF files now does not convert strings to factors. (#202, h/t @jllipatz)
• Implemented import() method for .dump R files. (#240)

rio 0.5.20

• Additional pointers were added to indicate how to load .doc, .docx, and .pdf files (#210, h/t Bill Denney)
• Ensure that tests only run if the corresponding package is installed. (h/t Bill Denney)
• Escape ampersands for html and xml export (#234 Alex Bokov)

rio 0.5.19

• Fix behavior of export() to plain text files when append = TRUE (#201, h/t Julián Urbano)
• import_list() now preserve names of Excel sheets, etc. when the 'which' argument is specified. (#162, h/t Danny Parsons)
• Modify message and errors when working with unrecognized file formats. (#195, h/t Trevor Davis)
• Add support for GraphPad Prism .pzfx files (#205, h/t Bill Denney)

rio 0.5.18

• Adjust import()/export() for JSON file formats to allow non-data frame objects. Behavior modeled after RDS format. (#199 h/t Nathan Day)

rio 0.5.17

• Fix the condition has length > 1 and only the first element will be used warning in gather_attributes(). (#196, h/t Ruben Arslan)

rio 0.5.16

• Fix the condition has length > 1 and only the first element will be used warning in standardize_attributes().

rio 0.5.15

• Modified some further code to produce compatibility with haven 2.0.0 release. (#188)
• Add some additional function suggestions for the ledger package. (#190, h/t Trevor Davis)

rio 0.5.14

• Changes to gather_attrs() for haven 2.0.0 release. (#188)
• Fixed a bug that generated a superfluous warning in import().
• Some style guide changes to code.

rio 0.5.13

• Allow import() of objects other than data frames from R-serialized (.rds and .rdata) files. Also, export of such objects to .rds files is supported, as previously intended. (#183, h/t Nicholas Jhirad)
• Added (suggests) support for import of EViews files using hexView::readEViews(). (#163, h/t Boris Demeshev)

# rio 0.5.12

• Add better package specification to install_formats() so that it reads from the Suggests field of the DESCRIPTION file.
• Edit header of README.Rmd (and thusly README.md) to stop complaining about a lack of title field.
• Fix typo in CONTRIBUTING.md (line said "three arguments", but only listed two).

rio 0.5.11

• Fixed a bug in import() wherein matlab files were ignored unless format was specified, as well as a related bug that made importing appear to fail for matlab files. (#171)
• Fixed a bug in export() wherein format was ignored. (#99, h/t Sebastian Sauer)
• Fixed a bug in the importing of European-style semicolon-separated CSV files. Added a test to ensure correct behavior. (#159, h/t Kenneth Rose)
• Updated documentation to reflect recent changes to the xlsx export() method. (#156)

rio 0.5.10

• Removed some csvy-related tests, which were failing on CRAN.

rio 0.5.9

• Removed longstanding warnings from the tests of export() to fixed-width format.

rio 0.5.8

• Export the get_ext() function. (#169)
• Fix a bug related to an xml2 bug (#168, h/t Jim Hester)
• import_list() gains improved file name handling. (#164, h/t Ruaridh Williamson)
• Removed the overwrite argument from export() method for xlsx files. Instead, existing workbooks are always overwritten unless which is specified, in which case only the specified sheet (if it exists) is overwritten. If the file exists but the which sheet does not, the data are added as a new sheet to the existing workbook. (#156)

rio 0.5.7

• Import of files with the ambiguous .dat extension, which are typically text-delimited files, are now passed to data.table::fread() with a message. Export to the format remains unsupported. (#98, #155)
• Added support for export to SAS XPORT format (via haven::write_xpt()). (#157)
• Switched default import package for SAS XPORT format to haven::read_xpt() with a haven = FALSE toggle restoring the previous default behavior using foreign::read.xpt(). (#157)

rio 0.5.6

• Fixed a bug in import() from compressed files wherein the which argument did not necessarily return the correct file if >=2 files in the compressed folder.
• Tweak handling of export() to xlsx workbooks when which is specified. (#156)

rio 0.5.5

• Expanded test suite and increased test coverage, fixing a few tests that were failing on certain CRAN builds.

rio 0.5.4

• New functions characterize() and factorize() provide methods for converting "labelled" variables (e.g., from Stata or SPSS) into character or factor variables using embedded metadata. This can also be useful for exporting a metadata-rich file format into a plain text file. (#153)

rio 0.5.3

• Fixed a bug in writing to .zip and .tar archives related to absolute file paths.
• Fixed some small bugs in import_list() and added tests for behavior.
• Add .bib as known-unsupported format via bib2df::bib2df().
• Expanded test coverage.

rio 0.5.3

• Fixed a bug in .import.rio_xlsx() when readxl = FALSE. (#152, h/t Danny Parsons)
• Added a new function spread_attrs() that reverses the gather_attrs() operation.
• Expanded test coverage.

rio 0.5.1

• export() now sets variables with a "labels" attribute to haven's "labelled" class.

rio 0.5.0

• CRAN Release.
• Restored import of openxlsx so that writing to xlsx is supported on install. (#150)

rio 0.4.28

• Improved documentation of mapping between file format support and the packages used for each format. (#151, h/t Patrick Kennedy)
• import_list() now returns a NULL entry for any failed imports, with a warning. (#149)
• import_list() gains additional arguments rbind_fill and rbind_label to control rbind-ing behavior. (#149)

rio 0.4.27

• Import to and export from the clipboard now relies on clipr::read_clip() and clipr::write_clip(), respectively, thus (finally) providing Linux support. (#105, h/t Matthew Lincoln)
• Added an rbind argument to import_list(). (#149)
• Added a setclass argument to import_list(), ala the same in import().
• Switched requireNamespace() calls to quietly = TRUE.

rio 0.4.26

• Further fixes to .csv.gz import/export. (#146, h/t Trevor Davis)

rio 0.4.25

• Remove unecessary urltools dependency.
• New function import_list() returns a list of data frames from a multi-object Excel Workbook, .Rdata file, zip directory, or HTML file. (#126, #129)
• export() can now write a list of data frames to an Excel (.xlsx) workbook. (#142, h/t Jeremy Johnson)
• export() can now write a list of data frames to an HTML (.html) file.

rio 0.4.24

• Verbosity of export(format = "fwf") now depends on options("verbose").
• Fixed various errors, warnings, and messages in fixed-width format tests.
• Modified defaults and argument handling in internal function read_delim().
• Fixed handling of "data.table", "tibble", and "data.frame" classes in set_class(). (#144)

rio 0.4.23

• Moved all non-critical format packages to Suggests, rather than Imports. (#143)
• Added support for Matlab formats. (#78, #98)
• Added support for fst format. (#138)

rio 0.4.22

• Rearranged README.
• Bumped readxl dependency to >= 0.1.1 (#130, h/t Yongfa Chen)
• Pass explicit excel_format arguments when using readxl functions. (#130)
• Google Spreadsheets can now be imported using any of the allowed formats (CSV, TSV, XLSX, ODS).
• Added support for writing to ODS files via readODS::write_ods(). (#96)

rio 0.4.21

• Handle HTML tables with <tbody> elements. (h/t Mohamed Elgoussi)

rio 0.4.20

• Fixed a big in the .import.rio_xls() and .import.rio_xlsx() where the sheet argument would return an error.

rio 0.4.19

• Fixed a bug in the import of delimited files when fread = FALSE. (#133, h/t Christopher Gandrud)

rio 0.4.18

• With new data.table release, export using fwrite() is now the default for text-based file formats.

rio 0.4.17

• Fixed a bug in .import.rio_xls() wherein the which argument was ignored. (h/t Mohamed Elgoussi)

rio 0.4.16

• Added support for importing from multi-table HTML files using the which argument. (#126)

rio 0.4.15

• Improved behavior of import() and export() with respect to unrecognized file types. (#124, #125, h/t Jason Becker)
• Added explicit tests of the S3 extension mechanism for .import() and .export().
• Attempt to recognize compressed but non-archived file formats (e.g., ".csv.gz"). (#123, h/t trevorld)

rio 0.4.14

• Update import and export methods to use new xml2 for XML and HTML export. (#86)

rio 0.4.13

• Fix failing tests related to stricter variable name handling for Stata files in development version of haven. (#113, h/t Hadley Wickham)
• Added support for export of .sas7bdat files via haven (#116)
• Restored support for import from SPSS portable via haven (#116)
• Updated import methods to reflect changed formal argument names in haven. (#116)
• Converted to roxygen2 documentation and made NEWS an explicit markdown file.

rio 0.4.12

• rio sets options(datatable.fread.dec.experiment=FALSE) during onLoad to address a Unix-specific locale issue.

rio 0.4.11

• Note unsupported NumPy i/o via RcppCNPy. (#112)
• Fix import of European-style CSV files (sep = "," and sep2 = ";"). (#106, #107, h/t Stani Stadlmann)

rio 0.4.10

• Changed feather Imports to Suggests to make rio installable on older R versions. (#104)
• Noted new RStudio add-in, GREA, that uses rio. (#109)
• Migrated CSVY-related code to separate package (https://github.com/leeper/csvy/). (#111)

rio 0.4.9

• Removed unnecessary error in xlsx imports. (#103, h/t Kevin Wright)

rio 0.4.8

• Fixed a bug in the handling of "labelled" class variables imported from haven. (#102, h/t Pierre LaFortune)

rio 0.4.7

• Improved use of the sep argument for import of delimited files. (#99, h/t Danny Parsons)
• Removed support for import of SPSS Portable (.por) files, given deprecation from haven. (#100)

rio 0.4.5

• Fixed other tests to remove (unimportant) warnings.
• Fixed a failing test of file compression that was found in v0.4.3 on some platforms.

rio 0.4.3

• Improved, generalized, tested, and expanded documentation of which argument in import().
• Expanded test suite and made some small fixes.

rio 0.4.2

• Added support to import and export to feather data serialization format. (#88, h/t Jason Becker)

rio 0.4.1

• Fixed behavior of gather_attrs() on a data.frame with no attributes to gather. (#94)
• Removed unrecognized file format error for import from compressed files. (#93)

rio 0.4.0

• CRAN Release.

rio 0.3.19

• Added a gather_attrs() function that moves variable-level attributes to the data.frame level. (#80)
• Added preliminary support for import from HTML tables (#86)

rio 0.3.18

• Added support for export to HTML tables. (#86)

rio 0.3.17

• Fixed a bug in import from remote URLs with incorrect file extensions.

rio 0.3.16

• Added support for import from fixed-width format files via readr::read_fwf() with a specified widths argument. This may enable faster import of these types of files and provides a base-like interface for working with readr. (#48)

rio 0.3.15

• Added support for import from and export to yaml. (#83)
• Fixed a bug when reading from an uncommented CSVY yaml header that contained single-line comments. (#84, h/t Tom Aldenberg)

rio 0.3.14

• Diagnostic messages were cleaned up to facilitate translation. (#57)

rio 0.3.12

• .import() and .export() are now exported S3 generics and documentation has been added to describe how to write rio extensions for new file types. An example of this functionality is shown in the new suggested "rio.db" package.

rio 0.3.11

• import() now uses xml2 to read XML structures and export() uses a custom method for writing to XML, thereby negating dependency on the XML package. (#67)
• Enhancements were made to import and export of CSVY to store attribute metadata as variable-level attributes (like imports from binary file formats).
• import() gains a which argument that is used to select which file to return from within a compressed tar or zip archive.
• Export to tar now tries to correct for bugs in tar() that are being fixed in base R via PR#16716.

rio 0.3.10

• Fixed a bug in import() (introduced in #62, 7a7480e5) that prevented import from clipboard. (h/t Kevin Wright)
• export() returns a character string. (#82)

rio 0.3.9

• The use of import() for SAS, Stata, and SPSS files has been streamlined. Regardless of whether the haven = TRUE argument is used, the data.frame returned by import() should now be (nearly) identical, with all attributes stored at the variable rather than data.frame level. This is a non-backwards compatible change. (#80)

rio 0.3.8

• Fixed error in export to CSVY with a commented yaml header. (#81, h/t Andrew MacDonald)

rio 0.3.7

• export() now allows automatic file compression as tar, gzip, or zip using the file argument (e.g., export(iris, "iris.csv.zip")).

rio 0.3.6

• Expanded verbosity of export() for fixed-width format files and added a commented header containing column class and width information.
• Exporting factors to fixed-width format now saves those values as integer rather than numeric.
• Expanded test suite and separated tests into format-specific files. (#51)

rio 0.3.5

• Export of CSVY files now includes commenting the yaml header by default. Import of CSVY accommodates this automatically. (#74)

rio 0.3.3

• Export of CSVY files and metadata now supported by export(). (#73)
• Import of CSVY files now stores dataset-level metadata in attributes of the output data.frame. (#73, h/t Tom Aldenberg)
• When rio receives an unrecognized file format, it now issues a message. The new internal .import.default() and .export.default() then produce an error. This enables add-on packages to support additional formats through new s3 methods of the form .import.rio_EXTENSION() and .export.rio_EXTENSION().

rio 0.3.2

• Use S3 dispatch internally to call new (unexported) .import() and .export() methods. (#42, h/t Jason Becker)

rio 0.3.0

• Release to CRAN.
• Set a default numerical precision (of 2 decimal places) for export to fixed-width format.

rio 0.2.13

• Import stats package for na.omit().

rio 0.2.11

• Added support for direct import from Google Sheets. (#60, #63, h/t Chung-hong Chan)

rio 0.2.7

• Refactored remote file retrieval into separate (non-exported) function used by import(). (#62)
• Added test sutie to test file conversion.
• Expanded test suite to include test of all export formats.

rio 0.2.6

• Cleaned up NAMESPACE file.

rio 0.2.5

• If file format for a remote file cannot be identified from the supplied URL or the final URL reported by curl::curl_fetch_memory(), the HTTP headers are checked for a filename in the Content-Disposition header. (#36)
• Removed longurl dependency. This is no longer needed because we can identify formats using curl's url argument.
• Fixed a bug related to importing European-style ("csv2") format files. (#44)
• Updated CSVY import to embed variable-level metadata. (#52)
• Use urltools::url_parse() to extract file extensions from complex URLs (e.g., those with query arguments). (#56)
• Fixed NAMESPACE notes for base packages. (#58)

rio 0.2.4

• Modified behavior so that files imported using haven now store variable metadata at the data.frame level by default (unlike the default behavior in haven, which can cause problems). (#37, h/t Ista Zahn)
• Added support for importing CSVY (http://csvy.org/) formatted files. (#52)
• Added import dependency on data.table 1.9.5. (#39)

rio 0.2.2

• Uses the longurl package to expand shortened URLs so that their file type can be easily determined.

rio 0.2.1

• Improved support for importing from compressed directories, especially web-based compressed directories. (#38)
• Add import dependency on curl >= 0.6 to facilitate content type parsing and format inference from URL redirects. (#36)
• Add bit64 to Suggests to remove an import warning.

rio 0.2

• import always returns a data.frame, unless setclass is specified. (#22)
• Added support for import from legacy Excel (.xls) files readxl::read_excel, making its use optional. (#19)
• Added support for import from and export to the system clipboard on Windows and Mac OS.
• Added support for export to simple XML documents. (#12)
• Added support for import from simple XML documents via XML::xmlToDataFrame. (#12)
• Added support for import from ODS spreadsheet formats. (#12, h/t Chung-hong Chan)
• Use data.table::fread by default for reading delimited files. (#3)
• Added support for import and export of dput and dget objects. (#10)
• Added support for reading from compressed archives (.zip and .tar). (#7)
• Added support for writing to fixed-width format. (#8)
• Set stringsAsFactors = FALSE as default for reading tabular data. (#4)
• Added support for HTTPS imports. (#1, h/t Christopher Gandrud)
• Added support for automatic file naming in export based on object name and file format. (#5)
• Exposed convert function.
• Added vignette, knitr-generated README.md, and updated documentation. (#2)
• Added some non-exported functions to simplify argument passing and streamline package API. (#6)
• Separated import, export, convert, and utilities into separate source code files.
• Expanded the set of supported file types/extensions, switched SPSS, SAS, and Stata formats to haven, making its use optional.

rio 0.1.2

• Updated documentation and fixed a bug in csv import without header.

rio 0.1.1

• Initial release

rio documentation built on June 22, 2024, 9:48 a.m.