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rlandfire
provides access to a diverse suite of spatial data layers via the LANDFIRE Product Services (LFPS) API. LANDFIRE is a joint program of the USFS, DOI, and other major partners, which provides data layers for wildfire management, fuel modeling, ecology, natural resource management, climate, conservation, etc. The complete list of available layers and additional resources can be found on the LANDFIRE webpage.
Install rlandfire
from CRAN:
install.packages("rlandfire")
The development version of rlandfire
can be installed from GitHub with:
# install.packages("devtools") devtools::install_github("bcknr/rlandfire")
Set build_vignettes = TRUE
to access this vignette in R:
devtools::install_github("bcknr/rlandfire", build_vignettes = TRUE)
This package is still in development, and users may encounter bugs or unexpected behavior. Please report any issues, feature requests, or suggestions in the package's GitHub repo.
rlandfire
To demonstrate rlandfire
, we will explore how ponderosa pine forest canopy cover changed after the 2020 Calwood fire near Boulder, Colorado.
library(rlandfire) library(sf) library(terra) library(foreign)
First, we will load the Calwood Fire perimeter data which was downloaded from Boulder County's geospatial data hub.
boundary_file <- file.path(tempdir(), "wildfire") utils::unzip(system.file("extdata/wildfire.zip", package = "rlandfire"), exdir = tempdir()) boundary <- st_read(file.path(boundary_file, "wildfire.shp")) %>% sf::st_transform(crs = st_crs(32613)) plot(boundary$geometry, main = "Calwood Fire Boundary (2020)", border = "red", lwd = 1.5)
We can use the function rlandfire::getAOI()
to create an area of interest (AOI) vector with the correct format for landfireAPIv2()
. getAOI()
handles several steps for us, it ensures that the AOI is returned in the correct order (xmin
, ymin
, xmax
, ymax
) and converts the AOI to latitude and longitude coordinates (as required by the API) if needed.
Using the extend
argument, we will increase the AOI by 1 km in all directions to provide additional context surrounding the burned area. This argument takes an optional numeric vector of 1, 2, or 4 elements.
aoi <- getAOI(boundary, extend = 1000) aoi
Alternatively, you can supply a LANDFIRE map zone number in place of the AOI vector. The function getZone()
returns the zone number containing an sf
object or which corresponds to the supplied zone name. See help("getZone")
for more information and an example.
For this example, we are interested in canopy cover data for two years, 2019 (200CC_19
) and 2022 (220CC_22
), and existing vegetation type (200EVT
). All available data products, and their abbreviated names, can be found in the products table which can be opened by calling viewProducts()
.
products <- c("200CC_19", "220CC_22", "200EVT")
email <- "rlandfire@example.com"
We can ask the API to project the data to the same CRS as our fire perimeter data by providing the WKID
for our CRS of interest and a resolution of our choosing, in meters.
projection <- 32613 resolution <- 90
We will use the edit_rule
argument to filter out canopy cover data that does not correspond to Ponderosa Pine Woodland. The edit_rule
statement should tell the API that when existing vegetation cover is anything other than Ponderosa Pine Woodland (7054
), the value of the canopy cover layers should be set to a specified value.
To do so, we specify that when 220EVT
is not equal (ne
) to 7054
, the "condition," the canopy cover layers should be set equal (st
) to 1
, the "change." The edit rule syntax is explained in more depth in the LFPS guide.
(How the API applies edit rules can be unintuitive. For example, if we used 'clear value' [cv
] or set the value outside of 0-100 the edits we want would not work. To work around this behavior, we set the values to 1
since it is not found in the original data set.)
edit_rule <- list(c("condition","200EVT","ne",7054), c("change", "200CC_19", "st", 1), c("change", "220CC_22", "st", 1))
Note: Edits are performed in the order that they are listed and are limited to fuel theme products (i.e., Fire Behavior Fuel Model 13, Fire Behavior Fuel Model 40, Forest Canopy Base Height, Forest Canopy Bulk Density, Forest Canopy Cover, and Forest Canopy Height).
If we wanted to restrict these edits to a certain area we could pass the path to a zip archive (.zip
) containing a shapefile to edit_mask
:
edit_mask <- "path/to/wildfire.zip"
Note: The file must follow ESRI shapefile naming standards (e.g., no special characters) and be less than 1MB in size.
Finally, we will provide a path to a temporary zip file. Setting the path as a temp file is not strictly necessary because if path
is left blank landfireAPIv2()
will save the data to a temporary folder by default.
path <- tempfile(fileext = ".zip")
landfireAPIv2()
Now we are able to submit a request to the LANDFIRE Product Services API with the landfireAPIv2()
function.
resp <- landfireAPIv2(products = products, aoi = aoi, email = email, projection = projection, resolution = resolution, edit_rule = edit_rule, path = path, verbose = FALSE)
landfireAPIv2()
will download your requested data into the folder provided in the path argument. If you did not provide one, you can find the path to your data in the $path
element of the landfire_api
object.
resp$path
path <- system.file("extdata/LFPS_Return.zip", package = "rlandfire")
The files returned by the LFPS API are compressed .zip
files. We need to unzip the directory before reading the .tif
file. Note: all additional metadata is included in this same directory.
lf_dir <- file.path(tempdir(), "lf") utils::unzip(path, exdir = lf_dir) lf <- terra::rast(list.files(lf_dir, pattern = ".tif$", full.names = TRUE, recursive = TRUE))
Now we can reclassify the canopy cover layers to remove any values which are not classified as Ponderosa Pine, calculate the change, and plot our results.
lf$US_200CC_19[lf$US_200CC_19 == 1] <- NA lf$US_220CC_22[lf$US_220CC_22 == 1] <- NA change <- lf$US_220CC_22 - lf$US_200CC_19 plot(change, col = rev(terrain.colors(250)), main = "Canopy Cover Loss - Calwood Fire (2020)", xlab = "Easting", ylab = "Northing") plot(boundary$geometry, add = TRUE, col = NA, border = "black", lwd = 2)
The LFPS REST API now embeds attributes in the GeoTIFF files for some variables
and returns a database file (.dbf
) containing the full attribute table.
To demonstrate, we will download the Existing Vegetation Cover product from LF 2.4.0
(240EVC
). Unlike in the example above we will submit a minimal request with
the default projection and resolution. We will also allow rlandfire
to
save the files to a temporary directory automatically. As mentioned above, we
can find the path to the temporary directory in the $path
element of the
landfire_api
object returned by landfireAPIv2()
.
resp <- landfireAPIv2(products = "240EVC", aoi = aoi, email = email, verbose = FALSE)
resp <- c() resp$path <- system.file("extdata/LFPS_cat_Return.zip", package = "rlandfire")
When we read in and plot the EVC layer the legend will now list the classnames
for each vegetation type.
lf_cat <- file.path(tempdir(), "lf_cat") utils::unzip(resp$path, exdir = lf_cat) evc <- terra::rast(list.files(lf_cat, pattern = ".tif$", full.names = TRUE, recursive = TRUE)) plot(evc)
To access the values each classname
is assigned to we can uses the levels()
function. This returns a simple two column data frame containing both the index
and active category, in our case the vegetation cover classes.
head(levels(evc)[[1]])
Alternatively, we can access the full attribute table using two methods.
We can use the function cats()
which works similarly to levels()
but
returns the full attribute table as a data frame. Alternatively, we can read the
database file using foreign::read.dbf()
. Both methods return similar results,
although in this case, we see that the .dbf
file includes an additional Count
column not included in the data frame returned from cats()
.
# cats attr_tbl <- cats(evc) # Find path to database file dbf <- list.files(lf_cat, pattern = ".dbf$", full.names = TRUE, recursive = TRUE) # Read file dbf_tbl <- foreign::read.dbf(dbf) head(attr_tbl[[1]]) head(dbf_tbl)
Visit the LANDFIRE webpage for information on citing LANDFIRE data layers. The package citation information can be viewed with citation("rlandfire")
.
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