rnetcarto: Fast Network Modularity and Roles Computation by Simulated Annealing (Rgraph C Library Wrapper for R)

It provides functions to compute the modularity and modularity-related roles in networks. It is a wrapper around the rgraph library (Guimera & Amaral, 2005, doi:10.1038/nature03288).

Author
Guilhem Doulcier [aut, cre] (R bindings, current implementation of the simulated annealing algorithm), Roger Guimera [ctb] (Author of the original rgraph library), Daniel B. Stouffer [aut, ths]
Date of publication
2015-11-12 12:58:34
Maintainer
Guilhem Doulcier <guilhem.doulcier@ens.fr>
License
GPL (>= 2)
Version
0.2.4

View on CRAN

Man pages

rnetcarto
Computes modularity and modularity roles from a network.

Files in this package

rnetcarto
rnetcarto/inst
rnetcarto/inst/CITATION
rnetcarto/inst/doc
rnetcarto/inst/doc/getting-started.Rmd
rnetcarto/inst/doc/getting-started.html
rnetcarto/inst/doc/getting-started.R
rnetcarto/configure.ac
rnetcarto/tests
rnetcarto/tests/testthat.R
rnetcarto/tests/testthat
rnetcarto/tests/testthat/test_netcarto.R
rnetcarto/src
rnetcarto/src/main.c
rnetcarto/src/main.h
rnetcarto/src/rgraph
rnetcarto/src/rgraph/netcarto
rnetcarto/src/rgraph/netcarto/main_netcarto_legacy.c
rnetcarto/src/rgraph/netcarto/main_netcarto.c
rnetcarto/src/rgraph/src
rnetcarto/src/rgraph/src/io.c
rnetcarto/src/rgraph/src/movements.h
rnetcarto/src/rgraph/src/fillpartitions.h
rnetcarto/src/rgraph/src/fillpartitions.c
rnetcarto/src/rgraph/src/movements.c
rnetcarto/src/rgraph/src/partition.h
rnetcarto/src/rgraph/src/io.h
rnetcarto/src/rgraph/src/sannealing.h
rnetcarto/src/rgraph/src/sannealing.c
rnetcarto/src/rgraph/src/partition.c
rnetcarto/src/rgraph/README.md
rnetcarto/src/Makevars.in
rnetcarto/src/Makevars.win
rnetcarto/NAMESPACE
rnetcarto/R
rnetcarto/R/rnetcarto.R
rnetcarto/vignettes
rnetcarto/vignettes/getting-started.Rmd
rnetcarto/README.md
rnetcarto/MD5
rnetcarto/build
rnetcarto/build/vignette.rds
rnetcarto/DESCRIPTION
rnetcarto/configure
rnetcarto/man
rnetcarto/man/rnetcarto.Rd
rnetcarto/cleanup