knitr::opts_chunk$set( collapse = TRUE, comment = "#>" )
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We provide several functions for Monte Carlo simulations to assess the
performance of the outlier detection algorithm outlier_detection()
and the
various statistical tools such as outliers_prop()
. The simulations can be
executed in parallel using various backends.
Monte Carlo simulations involve the following steps:
See the vignette Introduction to the robust2sls Package for more details on the model setup (step 1) and the different algorithms (step 2) that are implemented.
utils::vignette("overview", package = "robust2sls")
We conceptualise data as being generated by some true model, the so-called data-generating process (DGP). Specifying a DGP ourselves in simulations, allows us to check whether the theory works in practice. For example, we could use Monte Carlo simulations to check whether the 2SLS estimator recovers the true parameters; whether the proportion of detected outliers corresponds to the expected proportion; or whether a statistical test has expected size even in finite samples.
First of all, we need to specify a valid 2SLS model and its parameters. The
function generate_param()
can be used to generate random parameters of a 2SLS
model that fulfill the 2SLS conditions. For instance, the parameters are created
such that the structural error is uncorrelated to the instruments. Instead of
random parameters, they can also - partly or fully - be specified by the user.
library(robust2sls) p <- generate_param(dx1 = 3, dx2 = 2, dz2 = 3, intercept = TRUE, seed = 10)
Here, we create parameters for a model with 3 exogenous and 2 endogenous regressors, and 3 outside instruments. The model includes an intercept, so one of the exogenous instruments is simply a constant. The parameters are stored in a list.
Structural equation: $y_{i} = \beta_{1} x_{1,i} + \beta_{2} x_{2,i} + \beta_{3} x_{3,i} + \beta_{4} x_{4,i} + \beta_{5} x_{5,i} + u_{i}$
First stage: $x_{i} = \Pi^{\prime} z_{i} + r_{i}$,
where the vector $x_{i}$ contains all the regressors and the vector of instruments $z_{i}$ contains the 3 exogenous regressors and the two excluded instruments. $\Pi$ is the matrix of first stage coefficients.
The workhorse command for different types of trimmed 2SLS algorithms in the
robust2sls package is outlier_detection()
. The main decisions are
To keep things simple and the run-time of the simulations low, we do not iterate
the algorithm in this example. We use the Robustified 2SLS algorithm, which uses
the full sample for the initial estimates. As is commonly done, we use the
normal distribution as the reference distribution. To target a
false outlier detection rate of approximately 5%, we choose a cut-off value of
approximately 1.96, meaning that observations with an absolute standardised
residual larger than 1.96 are classified as outliers. This is set using the
sign_level
argument of the function, which together with the reference
distribution, ref_dist
, automatically determines the cut-off value.
The simulation function mc_grid()
also takes these arguments and internally
uses them to call the outlier_detection()
function repeatedly across
replications.
Again to keep the run-time low, we only vary the sample size. We choose small sample sizes of 50 and 100, respectively.
The functions mc()
and mc_grid()
are designed to be used either sequentially
or in parallel. They are implemented using the
foreach package.
To ensure that the results are reproducible across different ways of executing
the simulations (sequentially or parallel; within the latter as multisession,
multicore, cluster etc.), the package
doRNG is used to
execute the loops.
The Monte Carlo functions leave the registration of the foreach adaptor to the end-user. For example, both the packages doParallel and doFuture can be used.
We first consider running the Monte Carlo simulation in parallel. We set the
number of cores and create the cluster. Note that CRAN only allows for at most
two cores, so the code limits the number of cores. For registerDoParallel()
,
we need to export the functions that are used within mc_grid()
explicitly.
With registerDoFuture()
, it should not be necessary to explicitly export
variables or packages because it identifies them automatically via static code
inspection.
library(parallel) ncores <- 2 cl <- makeCluster(ncores) # export libraries to all workers in the cluster invisible(clusterCall(cl = cl, function(x) .libPaths(x), .libPaths()))
First, we use the doParallel package to run the simulations in parallel.
library(doParallel) registerDoParallel(cl) sim1 <- mc_grid(M = 100, n = c(100, 1000), seed = 42, parameters = p, formula = p$setting$formula, ref_dist = "normal", sign_level = 0.05, initial_est = "robustified", iterations = 0, shuffle = FALSE, shuffle_seed = 42, split = 0.5)
Next, we use the doFuture package for the parallel loop. Both implementations yield the same result.
library(doFuture) registerDoFuture() plan(cluster, workers = cl) sim2 <- mc_grid(M = 100, n = c(100, 1000), seed = 42, parameters = p, formula = p$setting$formula, ref_dist = "normal", sign_level = 0.05, initial_est = "robustified", iterations = 0, shuffle = FALSE, shuffle_seed = 42, split = 0.5) stopCluster(cl) # check identical results identical(sim1, sim2)
To run the loop sequentially, we can again use the doFuture package but this time setting a different plan. The doRNG ensures that the results are identical to those from the parallel loops.
library(doFuture) registerDoFuture() plan(sequential) sim3 <- mc_grid(M = 100, n = c(100, 1000), seed = 42, parameters = p, formula = p$setting$formula, ref_dist = "normal", sign_level = 0.05, initial_est = "robustified", iterations = 0, shuffle = FALSE, shuffle_seed = 42, split = 0.5) # check identical results identical(sim1, sim3)
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