Man pages for rsahmi
Single-Cell Analysis of Host-Microbiome Interactions
| blsd | Barcode level signal denoising |
| extractor | Extract reads and output from Kraken |
| parse_kraken_report | Parse kraken report file |
| prep_dataset | Prepare kraken report, k-mer statistics, UMI data |
| remove_contaminants | Identifying contaminants and false positives taxa (cell line... |
| slsd | Sample level signal denoising |
| taxa_counts | Quantitation of microbes |
