extract_expression_data: Extract Gene Expression Data from API Response
In rsynthbio: Synthesize Bio API Wrapper
View source: R/data-handlers.R
extract_expression_data R Documentation
Extract Gene Expression Data from API Response
Description
Extracts and combines gene expression data from a complex API response,
with proper formatting and metadata association.
Usage
extract_expression_data(parsed_content, as_counts = TRUE)
Arguments
parsed_content
The parsed API response list
as_counts
Logical, if FALSE, transforms the predicted expression counts into logCPM
(default is TRUE, returning raw counts).
Value
A list with two components:
- metadata: tibble containing sample metadata
- expression: tibble containing combined gene expression data
rsynthbio documentation built on June 8, 2025, 12:11 p.m.
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View source: R/data-handlers.R
| extract_expression_data | R Documentation |
Extract Gene Expression Data from API Response
Description
Extracts and combines gene expression data from a complex API response, with proper formatting and metadata association.
Usage
extract_expression_data(parsed_content, as_counts = TRUE)
Arguments
parsed_content |
The parsed API response list |
as_counts |
Logical, if FALSE, transforms the predicted expression counts into logCPM (default is TRUE, returning raw counts). |
Value
A list with two components: - metadata: tibble containing sample metadata - expression: tibble containing combined gene expression data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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