Man pages for rtpcr
qPCR Data Analysis
| ANOVA_DCt | Delta Ct ANOVA analysis with optional model specification |
| ANOVA_DDCt | Delta Delta Ct ANOVA analysis with optional model... |
| compute_wDCt | Cleaning data and weighted delta Ct (wDCt) calculation |
| data_1factor | Sample data (one factor three levels) |
| data_1factor_one_ref | Sample qPCR data (two different conditions) |
| data_1factor_one_ref_Eff | Sample qPCR data (two different conditions) |
| data_1factor_Two_ref | Sample qPCR data (one target and two reference genes under... |
| data_2factor | Sample data (two factor) |
| data_2factor3ref | Sample data in (two factor with blocking factor) |
| data_2factorBlock | Sample data in (two factor with blocking factor) |
| data_2factorBlock3ref | Sample data in (two factor with blocking factor and 3... |
| data_3factor | Sample data (three factor) |
| data_efficiency1 | Sample qPCR data: amplification efficiency 1 |
| data_efficiency_Yuan2006PMCBioinf | Sample qPCR data: amplification efficiency 2 |
| data_Heffer2020PlosOne | Sample data in (multi-group design with 6 target genes) |
| data_Lee_etal2020qPCR | Sample data (with technical replicates) |
| data_repeated_measure_1 | Repeated measure sample data |
| data_repeated_measure_2 | Repeated measure sample data |
| data_repeated_measure_3bLock | Sample data in (repeated-measures design with two reference... |
| data_ttest18genes | Sample data in (two-group design with multiple target genes) |
| data_withTechRep | Sample data (with technical replicates) |
| data_Yuan2006PMCBioinf | Sample data in (one factor with one reference gene) |
| efficiency | Amplification efficiency statistics and standard curves |
| globalVariables | Internal global variables |
| long_to_wide | Converts a 4-column qPCR long data format to wide format |
| Means_DDCt | Delta Delta Ct pairwise comparisons using a fitted model |
| meanTech | Computing the mean of technical replicates |
| multiplot | Combine multiple ggplot objects into a single layout |
| plotFactor | Bar plot of gene expression for 1-, 2-, or 3-factor... |
| TTEST_DDCt | Delta Delta Ct method t-test analysis |
| WILCOX_DDCt | Delta Delta Ct method wilcox.test analysis |
