Man pages for scPOP
Metrics for Benchmarking scRNA-Seq Batch Correction
| ari | Adjusted Rand Index |
| calc_sumZscore | Calc_sumZscore |
| compute_simpson_index | Compute the Local Inverse Simpson Index (LISI) |
| lisi | Compute Local Inverse Simpson's Index (LISI) |
| nmi | Normalized mutual information (NMI) |
| run_all_metrics | Running All Metrics |
| sceiad_subset_data | Example scRNA-seq data from the single cell eye in a... |
| scPOP | scPOP: Metrics for Benchmarking scRNA-Seq Batch Correction |
| silhouette_width | batch_sil |
| stratified_sample | Generate a stratified subsample for a vector given a grouping |
