Man pages for scPOP
Metrics for Benchmarking scRNA-Seq Batch Correction

ariAdjusted Rand Index
calc_sumZscoreCalc_sumZscore
compute_simpson_indexCompute the Local Inverse Simpson Index (LISI)
lisiCompute Local Inverse Simpson's Index (LISI)
nmiNormalized mutual information (NMI)
run_all_metricsRunning All Metrics
sceiad_subset_dataExample scRNA-seq data from the single cell eye in a...
scPOPscPOP: Metrics for Benchmarking scRNA-Seq Batch Correction
silhouette_widthbatch_sil
stratified_sampleGenerate a stratified subsample for a vector given a grouping
scPOP documentation built on Aug. 4, 2021, 5:06 p.m.