supportedCytokines: Gene set to score for the CytoSig or the Reactome databases.
In scaper: Single Cell Transcriptomics-Level Cytokine Activity Prediction and Estimation
View source: R/supportedCytokines.R
supportedCytokines R Documentation
Gene set to score for the CytoSig or the Reactome databases.
Description
Returns the names of the cytokines supported by either the CytoSig or the Reactome databases.
Usage
supportedCytokines(database = "cytosig")
Arguments
database
Database used for gene set construction and set scoring.
"cytosig" returns the 41 cytokines scored using the CytoSig database.
"reactome" returns the 30 cytokines scored using the Reactome database.
Value
List of cytokines associated with the CytoSig or the Reactome databases.
Examples
supportedCytokines(database = "cytosig")
supportedCytokines(database = "reactome")
scaper documentation built on April 17, 2025, 1:07 a.m.
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View source: R/supportedCytokines.R
| supportedCytokines | R Documentation |
Gene set to score for the CytoSig or the Reactome databases.
Description
Returns the names of the cytokines supported by either the CytoSig or the Reactome databases.
Usage
supportedCytokines(database = "cytosig")
Arguments
database |
Database used for gene set construction and set scoring.
|
Value
List of cytokines associated with the CytoSig or the Reactome databases.
Examples
supportedCytokines(database = "cytosig")
supportedCytokines(database = "reactome")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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