API for scphaser
Phase Variants Within Genes Using Allele Counts
| Global functions | |
|---|---|
| calc_gt_conc | Source code |
| call_gt | Man page Source code |
| compl_gt | Source code |
| counts2weight | Source code |
| filter_acset | Man page Source code |
| filter_feat_counts | Source code |
| filter_feat_gt | Source code |
| filter_feat_nminvar | Man page Source code |
| filter_homovars | Man page Source code |
| filter_singlefeat_count | Source code |
| filter_singlefeat_gt | Source code |
| filter_var_gt | Man page Source code |
| filter_var_mincount | Source code |
| filter_var_singlefeat_gt | Source code |
| filter_zerorow | Man page Source code |
| get_conc | Source code |
| get_concmat | Source code |
| get_mostfreqgt | Source code |
| get_ngtshared | Source code |
| get_phase_pval | Source code |
| get_var_ase | Source code |
| get_var_gt | Source code |
| get_var_gt_mat | Source code |
| get_wvar_ase | Source code |
| get_wvar_gt | Source code |
| gtperm | Source code |
| gtsynth_acset | Source code |
| marinov | Man page |
| mousehybrid | Man page |
| new_acset | Man page Source code |
| phase | Man page Source code |
| phase_cluster_ase | Source code |
| phase_cluster_gt | Source code |
| phase_exhaust_ase | Source code |
| phase_exhaust_gt | Source code |
| phase_feat | Source code |
| phase_feat_subset | Source code |
| plot_conc | Man page Source code |
| rac | Source code |
| racset | Man page Source code |
| rgt | Source code |
| score_var | Source code |
| set_aseweights | Source code |
| set_compl_gt | Source code |
| set_gt_conc | Man page Source code |
| set_haplotype | Source code |
| set_phased_gt | Source code |
| subset_cols | Man page Source code |
| subset_feat | Man page Source code |
| subset_rows | Man page Source code |
| wphase_cluster_ase | Source code |
| wphase_cluster_gt | Source code |
| wphase_exhaust_ase | Source code |
| wphase_exhaust_gt | Source code |
