internals: Functions for processing raw profiles
In scquantum: Estimate Ploidy and Absolute Copy Number from Single Cell Sequencing

l2e.normal.sd

R Documentation

Functions for processing raw profiles

Description

Functions for processing raw profiles

Usage

l2e.normal.sd(xs)

gat(x, iod)

tf.dp(y, lam)

segment.summarize(inprof, penalty, trans, seg, loc, se)

prof2invals(
  inprof,
  penalty,
  annotations,
  chrom.colname,
  bin.start.colname,
  bin.end.colname
)

seg2invals(seg_mean, seg_length, iod, annotations)

weighted.ecf(y, sds, s)

ecf.global.max(y, sds, smin = 1, smax = 8)

expected.peak.heights(cn, ratio.se, scale, svals)

quantum.sd(x, mu)

irises.pluspurple

timeseries.iod(v)