scrubr: Clean Biological Occurrence Records

Clean biological occurrence records. Includes functionality for cleaning based on various aspects of spatial coordinates, unlikely values due to political 'centroids', coordinates based on where collections of specimens are held, and more.

Install the latest version of this package by entering the following in R:
install.packages("scrubr")
AuthorScott Chamberlain [aut, cre]
Date of publication2016-03-08 00:23:05
MaintainerScott Chamberlain <myrmecocystus@gmail.com>
LicenseMIT + file LICENSE
Version0.1.1
https://github.com/ropenscilabs/scrubr

View on CRAN

Files

inst
inst/ignore
inst/ignore/cleangbifcoords.py
inst/extdata
inst/extdata/README.md
inst/extdata/herbaria.csv
inst/doc
inst/doc/scrubr_vignette.html
inst/doc/scrubr_vignette.Rmd
inst/vign
inst/vign/scrubr_vignette.md
inst/vign/scrubr_vignette.Rmd
tests
tests/testthat
tests/testthat/test-dates.R tests/testthat/test-taxonomy.R tests/testthat/test-coords.R
tests/testthat/taxdata1.rds
tests/testthat/test-dedup.R tests/testthat/test-dframe.R tests/test-all.R
NAMESPACE
NEWS.md
data
data/sampledata4.rda
data/sampledata3.rda
data/sampledata2.rda
data/sampledata1.rda
R
R/scrubr-package.R R/clean_df.R R/scrubr_datasets.R R/date-funs.R R/pipe.R R/do_coords.R R/coord-funs.R R/dedup.R R/print.R R/reassign.R R/rename.R R/trunc2.R R/guess_name.R R/taxonomy-funs.R R/zzz.R R/guess_latlon.R
vignettes
vignettes/scrubr_vignette.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/scrubr-package.Rd man/pipe.Rd man/dframe.Rd man/sample_data_2.Rd man/sample_data_4.Rd man/scrubr_datasets.Rd man/coords.Rd man/taxonomy.Rd man/dedup.Rd man/sample_data_3.Rd man/type_summ.Rd man/date.Rd man/sample_data_1.Rd
LICENSE

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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All documentation is copyright its authors; we didn't write any of that.