R/data.R

In seAMLess: A Single Cell Transcriptomics Based Deconvolution Pipeline for Leukemia

#' Grch38
#'
#' @docType data
#'
#' @usage data(grch38)
#'
#'
#' @keywords datasets
#'
"grch38"


#' TCGA-LAML bulk RNA-seq data downloaded from GDC
#'
#' @docType data
#'
#' @usage data(exampleTCGA)
#'
#' @keywords datasets
#'
"exampleTCGA"


#' TCGA-LAML example data meta file downloaded from GDC
#'
#' @docType data
#'
#' @usage data(exampleTCGAmeta)
#'
#' @keywords datasets
#'
"exampleTCGAmeta"

#' Trained RF model on Venetoclax Resistance
#'
#' @docType data
#'
#' @usage data(venoModel)
#'
#' @keywords datasets
#'
"venoModel"

#' A minimal seAMLess result list object
#'
#' @docType data
#'
#' @usage data(minRes)
#'
#'
#' @keywords datasets
#'
"minRes"