simf1gl: Simulate genotype likelihoods of F1 individuals.
In segtest: Tests for Segregation Distortion in Polyploids
simf1gl R Documentation
Simulate genotype likelihoods of F1 individuals.
Description
Simulate genotype likelihoods of F1 individuals.
Usage
simf1gl(n, g1, g2, rd = 10, alpha = 0, xi1 = 1/3, xi2 = 1/3)
Arguments
n
Sample size.
g1
The first parent's genotype.
g2
The second parent's genotype.
rd
The read depth.
alpha
The double reduction rate.
xi1
The first parent's preferential pairing parameter.
xi2
The second parent's preferential pairing parameter.
Value
The matrix of offspring genotype log-likelihoods.
Author(s)
David Gerard
Examples
set.seed(1)
simf1gl(n = 10, g1 = 1, g2 = 2)
segtest documentation built on July 1, 2025, 1:07 a.m.
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| simf1gl | R Documentation |
Simulate genotype likelihoods of F1 individuals.
Description
Simulate genotype likelihoods of F1 individuals.
Usage
simf1gl(n, g1, g2, rd = 10, alpha = 0, xi1 = 1/3, xi2 = 1/3)
Arguments
n |
Sample size. |
g1 |
The first parent's genotype. |
g2 |
The second parent's genotype. |
rd |
The read depth. |
alpha |
The double reduction rate. |
xi1 |
The first parent's preferential pairing parameter. |
xi2 |
The second parent's preferential pairing parameter. |
Value
The matrix of offspring genotype log-likelihoods.
Author(s)
David Gerard
Examples
set.seed(1)
simf1gl(n = 10, g1 = 1, g2 = 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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