sidier: Substitution and Indel Distances to Infer Evolutionary Relationships

Evolutionary reconstruction based on substitutions and insertion-deletion (indels) analyses in a distance-based framework.

AuthorA. Jesus Muñoz Pajares
Date of publication2015-02-28 01:23:26
MaintainerA.J. Muñoz-Pajares <ajesusmp@ugr.es>
LicenseGPL-2
Version3.0.1

View on CRAN

Functions

alignExample Man page
BARRIEL Man page
colour.scheme Man page
distance.comb Man page
double.plot Man page
ex_alignment1 Man page
Example_Spatial.plot_Alignment Man page
ex_Coords Man page
FIFTH Man page
FindHaplo Man page
GetHaplo Man page
HapPerPop Man page
MCIC Man page
mergeNodes Man page
mutation.network Man page
mutationSummary Man page
NINA.thr Man page
nt.gap.comb Man page
perc.thr Man page
pie.network Man page
pop.dist Man page
SIC Man page
sidier Man page
sidier-package Man page
simplify.network Man page
simuEvolution Man page
single.network Man page
spatial.plot Man page
zero.thr Man page

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.