simr: Power Analysis for Generalised Linear Mixed Models by Simulation
Version 1.0.2

Calculate power for generalised linear mixed models, using simulation. Designed to work with models fit using the 'lme4' package.

Browse man pages Browse package API and functions Browse package files

AuthorGreen Peter [aut, cre], MacLeod Catriona [aut], Alday Phillip [ctb]
Date of publication2016-11-19 10:16:05
MaintainerGreen Peter <greenp@landcareresearch.co.nz>
LicenseGPL (>= 2)
Version1.0.2
URL https://github.com/pitakakariki/simr
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("simr")

Man pages

doFit: Fit model to a new response.
doSim: Generate simulated response variables.
doTest: Apply a hypothesis test to a fitted model.
extend: Extend a longitudinal model.
getData: Get an object's data.
lastResult: Recover an unsaved simulation
makeGlmer: Create an artificial mixed model object
modify: Modifying model parameters.
powerCurve: Estimate power at a range of sample sizes.
powerSim: Estimate power by simulation.
print.powerSim: Report simulation results
simdata: Example dataset.
simrOptions: Options Settings for 'simr'
simr-package: simr: Simulation-based power calculations for mixed models.
tests: Specify a statistical test to apply

Functions

VarCorr<- Man page
addReplicateIndex Source code
addSquiggle Source code
alpha Source code
anovatest Source code
as.percentage Source code
as.percentage1 Source code
as.percentage2 Source code
as.percentage3 Source code
calcTheta Source code
calcTheta1 Source code
checkInteractions Source code
ci_abline Source code
coef<- Man page
compare Man page Source code
confint.powerCurve Man page Source code
confint.powerSim Man page Source code
counter_simr Source code
defaultdesc Source code
defaulttest Source code
doFit Man page Source code
doFit.default Source code
doFit.function Source code
doFit.glm Source code
doFit.glmerMod Source code
doSim Man page Source code
doSim.default Source code
doSim.function Source code
doSim.iter Source code
doSim.merMod Source code
doTest Man page Source code
doTest.default Source code
done Source code
drop1test Source code
extend Man page Source code
extend.data.frame Source code
extend.default Source code
extend.lm Source code
fcompare Man page Source code
fixed Man page Source code
fixeddesc Source code
fixef<- Man page
getData Man page Source code
getData<- Man page
getDefaultXname Source code
getPalette Source code
getSimrOption Man page Source code
krWrap Source code
krcompare Source code
krtest Source code
lastResult Man page Source code
list2maybe Source code
list_to_atomic Source code
lrcompare Source code
lrtest Source code
makeGlmer Man page Source code
makeLmer Man page Source code
makeMer Source code
maybe Source code
maybeFrame Source code
maybe_laply Source code
maybe_llply Source code
maybe_raply Source code
maybe_rlply Source code
maybecat Source code
modify Man page
observedPowerWarning Source code
pbWrap Source code
pbcompare Source code
pbtest Source code
plot.powerCurve Source code
plot.powerSim Source code
plotpal Source code
powerCurve Man page Source code
powerPlot Source code
powerSim Man page Source code
print.powerCurve Man page Source code
print.powerSim Man page Source code
print.test Source code
printerval Source code
progress_simr Source code
random Man page Source code
rcompare Man page Source code
removeSquiggle Source code
satest Source code
scale<- Man page
sigma.lm Source code
sigma<- Man page
simdata Man page
simr-package Man page
simrOptions Man page Source code
simrTag Source code
sometimes Source code
summary.powerCurve Man page Source code
summary.powerSim Man page Source code
tag Source code
test_error Source code
tests Man page
tidySeq Source code
ttest Source code
updateProgress Source code
waldchisqtest Source code
waldftest Source code
wrapTest Source code
ztest Source code

Files

inst
inst/CITATION
inst/doc
inst/doc/examples.html
inst/doc/fromscratch.Rmd
inst/doc/examples.Rmd
inst/doc/fromscratch.R
inst/doc/examples.R
inst/doc/fromscratch.html
tests
tests/testthat
tests/testthat/test_aaa.R
tests/testthat/test_powerSim.R
tests/testthat/test_zzz.r
tests/testthat/test_powerCurve.R
tests/testthat/test_extend.r
tests/testthat/test_logging.R
tests/testthat/test_graphics.R
tests/testthat/test_testLibrary.R
tests/testthat/helper_setup.R
tests/testthat/test_observed.R
tests/testthat/test_function.R
tests/testthat/test_options.R
tests/testthat/test_binomial.R
tests/testthat/test_getData.R
tests/testthat/test_logResponse.R
tests/testthat/test_modify.R
tests/testthat/test_fixef.r
tests/testthat/test_lm.r
tests/testthat/test_new.R
tests/test-all.R
NAMESPACE
NEWS.md
data
data/simdata.rda
R
R/modify.R
R/defaults.R
R/lm.r
R/doTest.R
R/graphics.R
R/new.R
R/maybe.R
R/testLibrary.R
R/glm.R
R/simr.R
R/powerSim.R
R/progress.R
R/powerPlot.R
R/options.R
R/doSim.R
R/print.R
R/extend.R
R/glmm.R
R/doFit.R
R/powerCurve.R
R/extendWithin.R
R/getData.R
R/oops.R
vignettes
vignettes/fromscratch.Rmd
vignettes/examples.Rmd
README.md
MD5
build
build/make_simdata.r
build/vignette.rds
DESCRIPTION
man
man/lastResult.Rd
man/modify.Rd
man/doFit.Rd
man/doTest.Rd
man/doSim.Rd
man/tests.Rd
man/print.powerSim.Rd
man/simdata.Rd
man/simrOptions.Rd
man/makeGlmer.Rd
man/extend.Rd
man/powerSim.Rd
man/getData.Rd
man/simr-package.Rd
man/powerCurve.Rd
simr documentation built on May 19, 2017, 4:06 p.m.