additional.linear.constraints | Additional Linear Constraints |
assign.variables | Assign variables from input file to variable names |
diag.panel.hist | define scatterplot diagonal formatting |
dirichlet.moments | Calculate the moments of the Dirichlet distribution given the... |
filename.clean | Clean up filenames, replacing spaces and bad characters with... |
get.data | Get data from Excel spreadsheet |
indy.mixture.isotope.mvn.sample | Strip out the samples associated with the current mixture |
isotope.mvn.sampling | Samples isotope values from the Multivariate Normal... |
mcmc.diagnostics | MCMC Diagnostics |
model.mass.balance.equation | Mass balance equations for converting isotope values to... |
model.mass.balance.equation.inverse | Inverse Mass balance equations for converting biomass sampled... |
numerical.summaries | Numerical summaries |
polytope.constraints | Polytope constraints (incorporates both Isotope and... |
polytope.multiple.samples | Defines linear constraints for each sample from the isotope... |
prior.on.p | Prior on the vector of source proportions, p, is defined by... |
progress.time | returns the time taken since the time started |
resample.dirichlet.p | Resamples weighted samples from the polytope from the... |
sample.from.polytope | CORE function to draw the samples from the polytope |
sisus-package | SISUS: Stable Isotope Sourcing using Sampling |
sisus.run | driver program for SISUS |
s.plot.convex.hull | Convex Hull plot |
s.plot.convex.hull.titles | outside titles Convex Hull matrix plot |
s.plot.marginal.histogram | Plot marginal histograms |
s.plot.scatterplot.sample | Scatterplot matrix |
s.plot.settings.begin.end | Plot settings for all plots |
write.Ab | write A matrix and b vector |
write.input | Write input values out to a file |
write.model.settings | Write model settings to the process log |
write.out | write directly to the screen |
write.progress | write progress to the screen |
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