snplist: Tools to Create Gene Sets

A set of functions to create SQL tables of gene and SNP information and compose them into a SNP Set, for example for use with the RSNPset package, or to export to a PLINK set.

Install the latest version of this package by entering the following in R:
install.packages("snplist")
AuthorChanhee Yi, Alexander Sibley, and Kouros Owzar
Date of publication2016-12-14 00:11:21
MaintainerAlexander Sibley <alexander.sibley@dm.duke.edu>
LicenseGPL-3
Version0.17

View on CRAN

Files

inst
inst/doc
inst/doc/snplist.Rnw
inst/doc/snplist.R
inst/doc/snplist.pdf
src
src/Makevars
src/exportPLINKSet.cpp
src/Makevars.win
NAMESPACE
NEWS
R
R/getBioMartData.R R/makeGeneSet.R R/exportPLINKSet.R R/setSNPTable.R R/setGeneTable.R
vignettes
vignettes/snplist.Rnw
MD5
build
build/vignette.rds
DESCRIPTION
man
man/makeGeneSet.Rd man/setSNPTable.Rd man/getBioMartData.Rd man/snplist-package.Rd man/setGeneTable.Rd man/exportPLINKSet.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.