som: Self-Organizing Map

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Self-Organizing Map (with application in gene clustering).

Author
Jun Yan <jyan@stat.uconn.edu>
Date of publication
2016-07-06 10:26:15
Maintainer
Jun Yan <jyan@stat.uconn.edu>
License
GPL (>= 3)
Version
0.3-5.1

View on CRAN

Man pages

filtering
Filter data before feeding som algorithm for gene expression...
normalize
normalize data before feeding som algorithm
plot.som
Visualizing a SOM
qerror
quantization accuracy
som
Function to train a Self-Organizing Map
som-internal
Internal som functions
summary
summarize a som object
yeast
yeast cell cycle

Files in this package

som
som/src
som/src/Makevars
som/src/som.cc
som/src/tntsupp.h
som/src/tnt
som/src/tnt/region2d.h
som/src/tnt/lapack.h
som/src/tnt/trisolve.h
som/src/tnt/tnt.h
som/src/tnt/transv.h
som/src/tnt/version.h
som/src/tnt/tntreqs.h
som/src/tnt/tntmath.h
som/src/tnt/fortran.h
som/src/tnt/vecadaptor.h
som/src/tnt/cmat.h
som/src/tnt/fmat.h
som/src/tnt/stopwatch.h
som/src/tnt/index.h
som/src/tnt/region1d.h
som/src/tnt/fcscmat.h
som/src/tnt/cholesky.h
som/src/tnt/subscript.h
som/src/tnt/triang.h
som/src/tnt/vec.h
som/src/tnt/fspvec.h
som/src/tnt/lu.h
som/src/tnt/qr.h
som/src/SomParam.h
som/src/sub.h
som/NAMESPACE
som/data
som/data/yeast.tab.bz2
som/R
som/R/som.R
som/R/zzz.R
som/MD5
som/DESCRIPTION
som/Changes
som/man
som/man/qerror.Rd
som/man/som.Rd
som/man/yeast.Rd
som/man/normalize.Rd
som/man/som-internal.Rd
som/man/plot.som.Rd
som/man/summary.Rd
som/man/filtering.Rd
som/INDEX