fitted.msDS: Extract Model Fitted Values for msDS Object

In spAbundance: Univariate and Multivariate Spatial Modeling of Species Abundance

Extract Model Fitted Values for msDS Object

Description

Method for extracting model fitted values and cell-specific detection probabilities from a multi-species hierarchical distance sampling (msDS) model.

Usage

## S3 method for class 'msDS'
fitted(object, ...)

Arguments

object	object of class msDS.
...	currently no additional arguments

Details

A method to the generic fitted function to extract fitted values and detection probabilities for fitted model objects of class msDS.

Value

A list comprised of:

y.rep.samples	A four-dimensional numeric array of fitted values for use in Goodness of Fit assessments. Array dimensions correspond to MCMC samples, species, sites, and distance bin.
pi.samples	A four-dimensional numeric array of cell-specific detection probability values. Values correspond to the probability of detecting an individual within a given distance band at a given location. Array dimensions correspond to MCMC samples, species, sites, and distance band.

spAbundance documentation built on Oct. 6, 2024, 1:08 a.m.