spBFA: Spatial Bayesian Factor Analysis

Implements a spatial Bayesian non-parametric factor analysis model with inference in a Bayesian setting using Markov chain Monte Carlo (MCMC). Spatial correlation is introduced in the columns of the factor loadings matrix using a Bayesian non-parametric prior, the probit stick-breaking process. Areal spatial data is modeled using a conditional autoregressive (CAR) prior and point-referenced spatial data is treated using a Gaussian process. The response variable can be modeled as Gaussian, probit, Tobit, or Binomial (using Polya-Gamma augmentation). Temporal correlation is introduced for the latent factors through a hierarchical structure and can be specified as exponential or first-order autoregressive. Full details of the package can be found in the accompanying vignette. Furthermore, the details of the package can be found in "Bayesian Non-Parametric Factor Analysis for Longitudinal Spatial Surfaces", by Berchuck et al (2019), <arXiv:1911.04337>. The paper is in press at the journal Bayesian Analysis.

Package details

AuthorSamuel I. Berchuck [aut, cre]
MaintainerSamuel I. Berchuck <sib2@duke.edu>
LicenseGPL (>= 2)
Version1.3
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("spBFA")

Try the spBFA package in your browser

Any scripts or data that you put into this service are public.

spBFA documentation built on March 31, 2023, 9:59 p.m.