sparseBC: Sparse Biclustering of Transposable Data

Implements the sparse biclustering proposal of Tan and Witten (2014), Sparse biclustering of transposable data. Journal of Computational and Graphical Statistics 23(4):985-1008.

Author
Kean Ming Tan
Date of publication
2015-02-15 07:35:48
Maintainer
Kean Ming Tan <keanming@u.washington.edu>
License
GPL (>= 2)
Version
1.1

View on CRAN

Man pages

image.sparseBC
Image plot of an object of class 'sparseBC' or 'matrixBC'
lung
Lung cancer gene expression data
matrixBC
MVN biclustering
matrixBC.BIC
Do tuning parameter (lambda) selection for MVN biclustering...
sparseBC
Sparse biclustering
sparseBC.BIC
Do tuning parameter (lambda) selection for sparse...
sparseBC.choosekr
Do tuning parameter K and R selection for sparse biclustering...
sparseBC-package
Fit sparse biclustering and matrix-variate normal...
summary.sparseBC
Plot an object of class 'sparseBC' or 'matrixBC'

Files in this package

sparseBC
sparseBC/NAMESPACE
sparseBC/data
sparseBC/data/datalist
sparseBC/data/lung.rda
sparseBC/R
sparseBC/R/image.matrixBC.R
sparseBC/R/Functions.R
sparseBC/R/image.sparseBC.R
sparseBC/R/sparseBC.choosekr.R
sparseBC/R/matrixBC.BIC.R
sparseBC/R/summary.sparseBC.R
sparseBC/R/matrixBC.R
sparseBC/R/summary.matrixBC.R
sparseBC/R/sparseBC-internal.R
sparseBC/R/sparseBC.BIC.R
sparseBC/R/print.matrixBC.R
sparseBC/R/print.sparseBC.R
sparseBC/R/sparseBC.R
sparseBC/MD5
sparseBC/DESCRIPTION
sparseBC/man
sparseBC/man/sparseBC.Rd
sparseBC/man/sparseBC.BIC.Rd
sparseBC/man/matrixBC.BIC.Rd
sparseBC/man/matrixBC.Rd
sparseBC/man/lung.Rd
sparseBC/man/summary.sparseBC.Rd
sparseBC/man/image.sparseBC.Rd
sparseBC/man/sparseBC-package.Rd
sparseBC/man/sparseBC.choosekr.Rd