API for splikit
Analysing RNA Splicing in Single-Cell RNA Sequencing Data
| Global functions | |
|---|---|
| .gene_exons | Source code |
| .gtf_attr | Source code |
| .load_gene_gtf | Source code |
| .onAttach | Source code |
| .tx_junctions | Source code |
| SplikitObject | Man page |
| calcDeviances_ratio | Source code |
| calcNBDeviancesWithThetaEstimation | Source code |
| check_openmp_enabled | Source code |
| cppBetabinPseudoR2 | Source code |
| cppBetabinPseudoR2_mixed1 | Source code |
| cppBetabinPseudoR2_mixed2 | Source code |
| cppBetabinPseudoR2_sparse | Source code |
| error | Source code Source code |
| find_variable_events | Man page Source code |
| find_variable_genes | Man page Source code |
| get_pseudo_correlation | Man page Source code |
| get_rowVar | Man page Source code |
| get_silhouette_mean | Man page Source code |
| load_toy_M1_M2_object | Man page |
| load_toy_SJ_object | Man page Source code |
| make_eventdata_plus | Man page |
| make_gene_count | Man page |
| make_junction_ab | Man page Source code |
| make_m1 | Man page Source code |
| make_m2 | Man page |
| make_m2_cpp | Man page Source code |
| make_m2_cpp_parallel | Man page Source code |
| make_velo_count | Man page |
| plot_exclusive_junctions | Man page |
| plot_exclusive_junctions_event | Man page |
| plot_exclusive_junctions_pdf | Man page |
| print.splikit_junction_plot | Man page |
| rowVariance_cpp | Source code |
| silhouette_avg | Source code |
| splikit | Man page Source code |
| splikit-package | Man page |
| standardizeSparse_variance_vst | Source code |
