API for spp
ChIP-Seq Processing Pipeline
| Global functions | |
|---|---|
| add.broad.peak.regions | Man page |
| densum | Man page |
| find.binding.positions | Man page |
| get.binding.characteristics | Man page |
| get.broad.enrichment.clusters | Man page |
| get.conservative.fold.enrichment.profile | Man page |
| get.conservative.fold.enrichment.profile2 | Man page |
| get.mser | Man page |
| get.mser.interpolation | Man page |
| get.smoothed.enrichment.mle | Man page |
| get.smoothed.enrichment.mle2 | Man page |
| get.smoothed.tag.density | Man page |
| output.binding.results | Man page |
| points_within | Man page |
| read.arachne.tags | Man page |
| read.bam.tags | Man page |
| read.bin.maqmap.tags | Man page |
| read.bowtie.tags | Man page |
| read.eland.tags | Man page |
| read.helicos.tags | Man page |
| read.maqmap.tags | Man page |
| read.meland.tags | Man page |
| read.short.arachne.tags | Man page |
| read.tagalign.tags | Man page |
| remove.local.tag.anomalies | Man page |
| select.informative.tags | Man page |
| spp | Man page |
| spp-package | Man page |
| write.broadpeak.info | Man page |
| write.narrowpeak.binding | Man page |
| writewig | Man page |
